Shewanella halotolerans: K0H81_04410
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Entry
K0H81_04410 CDS
T09172
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shao03009
]
K0H81_04410
Ribosome biogenesis [BR:
shao03009
]
Prokaryotic type
ribosomal protein modification factors
K0H81_04410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
YjiS-like
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
QYJ90849
LinkDB
All DBs
Position
993918..996104
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
ARDISTDNIRLSQNNIVDPEDRYNQIFQIQVELPDDISDKDREGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGQPGGDSSTYILGKDLPLEQTIANMTEILAGLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGASKESALCSALGEFIERLNCNFFYNDQFFGLD
IANSEFVHYPNEKWFALTDDDSLPEGMLDDYSLEIYNPDGELCGSHLIDTNSGNIERGIC
TIPYKRRSDGETVYFPSNLIENLFLSNGMSAGNNLQEAEVQCLSEIFERAVKRQIIEQEI
VLPDVPMAVLEKYPSILAGIKGLEEQGFPVVVRDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSNKADYEFCEWDFSGTNEEEAKGLFGILESLGKEVYVAEFEELGASACRILVPDYSEVY
PVDDLIWDNTNKALDYREDILNLHRLSDDELADLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEEALELVEDFLQFNDNTVQRGLFYQAMSAVLEVTLDEE
LELEDFIGNFTRMFGEEVMAQVVGSVNGEVRFSGLTETSMALEGIEPHLRLIESYKKLHQ
ARKIKAGL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgataacctaagactcgaagccaagttcgacgatttt
accgtcaccgccgatcagccgatccgctacaagggtgatggctcggcgcctagccccttt
gattatttcctggcgtcgtcggccttgtgtgcggcctatttcgtaaaggtctactgtaag
gcgcgcgatatctcgaccgacaacattcgtctgtctcagaacaatatcgtcgatccggaa
gatcgctataaccagatcttccagatccaggtcgagctgcccgacgatatctcagacaaa
gatcgcgaggggatcctgcgctccatcgaccgttgtactgtgaagaaggtggtacagaca
ggcccagaatttaagattgagacggtagaaaacctggacgccgatgccaacgccatgttg
atgggtcagccaggtggcgacagcagcacctatattctgggtaaagatctgccgcttgag
cagaccatcgccaacatgacggagatcctggccggactcgggatgaagatagagatctcc
tcctggcgtaacatagtgcccaacgtctggtcgctgcatattcgtgatgcggcctcgccc
atgtgcttcaccaatggtaaaggcgcgagcaaggagagcgccctctgttcggcgctgggc
gagtttatcgagcgtctgaactgcaacttcttctacaacgatcagttcttcggcctggat
atcgcaaatagcgagtttgtgcactaccccaacgagaagtggttcgccctcaccgatgat
gactcgctgcctgaaggcatgctggatgactacagcctggagatctataacccggatggc
gagctgtgtggctcgcacctgatcgataccaactcgggcaatatcgagcgtggcatctgc
accattccttacaagcgtcgctcggacggtgagaccgtctatttcccatcgaatctgatt
gagaacctgttcctcagtaacggcatgagtgcgggcaacaacctgcaggaggccgaggta
cagtgtttgtcggagatcttcgagcgcgcggtgaagcgtcagattatcgagcaggagata
gtgctacccgacgtgcctatggccgtgctggagaagtaccctagcattcttgccggtatc
aagggactcgaggagcaaggcttccctgtagtagtgagagatgcctccctgggcggtcaa
ttccccgtgatgtgtgtgaccctgatgaaccctaagacaggcggcgtgttcgcctctttc
ggtgcgcacccaagcttcgaggtggcgctggagcgcagcctgaccgagcttttgcagggc
cgcagcttcgagggtcttaacgatgtgcctaagccgacctttaacagcatggcggtgagc
gagccggagaacttcgtcgagcactttatcgactcgaccggggtgatctcctggcgcttc
ttcagcaacaaggcggactatgagttctgcgagtgggacttctctggcaccaacgaggag
gaggccaaggggctgttcggcatcctggaaagcctgggcaaggaggtctatgtcgccgag
tttgaagagcttggcgcatctgcctgtcgcatcctggtgcctgactactctgaggtttat
ccggtggacgacctcatctgggacaacaccaacaaggcgctggactatcgtgaagatatc
ctcaacctgcacagactgagcgacgatgagcttgccgatctggtcaatcgtctggaagag
agccaactggataactacacggatatccgtaccctgatcggtatcgtcttcgacgaaaac
accgtctggggacagctaaccattatcgagctgaagatcctcatctatctggcgttgggc
gcccacgaagaggcgctggagctggtggaagactttttgcagttcaacgacaacacggtg
cagcgtggcctcttctaccaggcgatgagcgcggtgctcgaggtgactctggatgaggag
ctcgagcttgaggactttatcggtaactttacccgcatgtttggtgaagaggtgatggct
caggtggttggttcggtgaacggcgaggtgcgcttctcaggccttaccgagaccagcatg
gcactggaagggatagagccacatctgcgtctcatcgagagctacaagaagttgcatcag
gctcgtaaaattaaagccggactttaa
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