Shewanella halotolerans: K0H81_04550
Help
Entry
K0H81_04550 CDS
T09172
Name
(GenBank) LysR family transcriptional regulator
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shao03000
]
K0H81_04550
Transcription factors [BR:
shao03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K0H81_04550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
FilR1_N
HVO_A0261_N
HTH_20
HTH_45
HTH_8
Motif
Other DBs
NCBI-ProteinID:
QYJ90876
LinkDB
All DBs
Position
1025463..1026356
Genome browser
AA seq
297 aa
AA seq
DB search
MARSVGTELELIHLFVHLVNTGGFSQVAKELGMPVATVSRKVTKLESLLDTQLIMRSTRK
LRLTEEGSELFGRYQNVVAQFDRCSEPRVEKAEGTLRIAAPVSIISMIFIGVLNDFSKAY
PDIQLHITQNNSSIDLIDEGVDVAIVGGAQPDSSWVSKSLGVLDYGLFASPGYLACAGTP
QHPDQLVEHSLIKVWPLFNWSMKHVSGEDFYYEGPAKLTLGDLNGAVRATVDDGGILYGP
ELFVKGELASGELRRVLPDWHGEQRRISLLYHQRTHQPLKVKLFIEFMQDRASCLFH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtagcgtaggcacagaacttgagcttatccatctttttgtgcatctggtgaat
accggcggtttttctcaggtggccaaagagctgggtatgcctgtggcgaccgttagccgt
aaggtgactaagctggaaagcctgcttgatactcagctgatcatgcgcagcacccgtaag
ctgaggttaaccgaggagggcagcgagctctttggccgctatcagaatgtggtggcccag
tttgaccgctgtagcgagcccagagtcgagaaggccgaaggtacactgcgcatcgcggcg
ccagtctcgatcatctcgatgatcttcatcggggtgctaaacgacttctccaaggcctat
ccggacattcagctgcatatcacccagaataactccagtatcgatctgattgacgaaggg
gtggacgtggccatcgtcggcggcgcccagcccgactcctcctgggtctctaagtctctg
ggggtcttggattatggcctgttcgcctcgccgggctaccttgcctgcgccggcacgccc
caacatccggatcagctggtggagcactccttgatcaaggtgtggcccctgtttaactgg
tcgatgaagcatgtcagcggcgaagatttctattacgaaggccccgccaagttgaccctt
ggggatctcaacggtgcggtgcgggccacggtagacgatggcggtattctttacggccca
gagctgttcgtgaagggtgagcttgcctcgggtgagcttcgccgggtgcttcccgactgg
cacggcgagcagcgacgcatctccctgctgtaccatcagcgcacccatcagcccctcaag
gtgaagctgtttatcgagtttatgcaggacagagccagctgtctgttccattag
DBGET
integrated database retrieval system
