Shewanella halotolerans: K0H81_06490
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Entry
K0H81_06490 CDS
T09172
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
shao03029
]
K0H81_06490 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shao02000
]
K0H81_06490 (bamA)
Mitochondrial biogenesis [BR:
shao03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
K0H81_06490 (bamA)
Transporters [BR:
shao02000
]
Other transporters
Pores ion channels [TC:
1
]
K0H81_06490 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
QYJ91227
LinkDB
All DBs
Position
1487871..1490354
Genome browser
AA seq
827 aa
AA seq
DB search
MRLNKIFASMLLVGASLSGKGWADTFQPFEVTDIQVKGLQRVALGAALLNIPIKVGDRVD
ELRLQQAIKSLYSSTNFEHIEVSRDGNVLVVTVKERPTISTVTFEGNKDIKDEQLQESLD
GSGVKAGESLDRTMLSGIEKSLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAA
EIRQINVVGNTVFSDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTFYHNRGY
IRFEVTSTQVAMTPDRKGLYITINVDEGEQYKVKEVNLTGDLMGREEVMQAILPIKVGDT
YNGADVTFTEEMYGKYLGRFGYAYPEVKTYPEIDDETKEVALNVNIKPGKRVYVRSINFT
GNQVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGYFETVDTQTVQVPGTDDLVDVD
FTVKEQPSGSFNAGVGYGTESGLSLQFGVQQSNFLGTGNQAGINLNTNKYSKNVNINYTD
PYFTKDGVSLGGSIYWNEFDAQEANLERYKNSSYGIAVNSGFPINEYNRINGGIGYRHNS
ISEISAYEQALRFYNIYRDANDPNADLSFDNFELTLGWYRSTLNRGTFPTDGSSQRLSGK
MTVPGSDLQYFKTDFDTSFYWPINRSHSFVLLTKARLGYGNGYGQYNDNDQILPFWENYY
SGGSSSLRGFKSNSVGPRSFYLYRGSEPCSPDPAGDTCTLPGDPNRVTVSGGRSIGGNAI
ATASVEMIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDAYRFLPAEQFDKLSDYSDP
GRIRASAGMSVQWLSPMGPMVFSLAWPIKKYEDDDTEIFSFNIGKTF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaataaaatttttgcctcgatgttattagtcggtgcgtctttatcagggaag
ggttgggccgatacattccagccttttgaagtgaccgacatccaggttaagggattgcag
cgtgttgcactgggtgcggcgctgttgaatattcctatcaaggtgggagacagggtcgac
gaactgcgtctgcagcaggcgatcaagagcctgtattcctcgaccaacttcgagcatatc
gaggtgagccgcgatggcaacgtcttggtggtgacggtcaaagaaaggcctaccatcagc
actgtgaccttcgaaggcaacaaggacattaaagacgagcagctacaagagagtctcgac
ggcagtggcgtcaaggccggtgagtcgcttgatcgcaccatgcttagcggcatcgagaag
agcctgcaggatttctactatggcgtgggtaagtatggcgccaaggtggaggctcaggtg
atcaacctgccgcgtaaccgtgtcgagttgaagtttaagtttaccgaaggtttggcggca
gagattcgtcagatcaacgtggtgggcaacactgtctttagcgacgccgaactgatcggc
atgctggagctgaaagactatgtggcctggtgggatctcttcggcgagcgccgctaccag
aagcagaagctgcaggccgatcttgaaaccatcaagaccttctaccataaccgtggttat
atccgtttcgaggtgacctcgactcaggtggcgatgacccctgaccgtaagggtctctac
atcaccatcaacgtcgatgagggtgagcagtataaggttaaagaagttaacctgactggc
gacctcatgggccgcgaagaggtgatgcaggcgattctgccgatcaaggtaggcgatacc
tataacggcgcagacgtgacctttactgaagagatgtatggcaagtatttgggccgtttc
ggctatgcctaccctgaggtgaagacctatcctgagatcgatgatgagaccaaagaggtc
gccctcaacgtcaacatcaagccgggtaagcgcgtctatgtgcgtagcattaactttacc
ggtaaccaggtcactaaagatgaggtgatgcgccgcgagctgcgtcagatggaaggcgcc
tggctgaactcggcccaggtcgagcaatcgaaagcgcgtcttaaccgcctgggttacttc
gaaactgtcgatacccagacggttcaggtgccgggcacagacgatctggtggacgtcgat
tttaccgtgaaggagcagccatcaggctcgttcaacgcgggtgtgggttatggtaccgag
tcgggcctgagcctgcagtttggtgtgcagcagagcaacttcctgggtacgggtaaccag
gcggggattaaccttaacaccaacaagtactcgaagaacgtcaacatcaactacacagat
ccttacttcaccaaagatggcgtgagcctaggtggtagcatctactggaacgagtttgac
gctcaggaagcgaacctcgaacgctataagaacagttcttacggtattgccgtaaactct
ggcttcccgatcaacgaatacaaccgtatcaacggtggtatcggctatcgccacaacagc
atctcggagatctcggcctacgagcaggccctgcgtttctacaacatctatcgtgatgcc
aacgaccctaacgccgacctgtcgttcgataactttgagctgaccctcggctggtatcgc
agtacgcttaaccgcggcaccttcccaaccgatggttcgtcgcagcgcttgagcggcaag
atgacggtaccgggttcggatctgcagtactttaagacagatttcgataccagcttctac
tggccaatcaaccgcagccacagcttcgtactcctgactaaggcgcgtctgggttatggt
aacggttatggtcagtacaacgacaacgaccagatcttacctttctgggagaactactac
tcaggtggtagcagctcgctgcgtggctttaagtctaactctgtgggcccacgctcattc
tacctgtatcgtggtagtgagccgtgctcgccagatccagcaggggatacatgtaccttg
ccaggggatcctaaccgtgtcactgtgagcggtggtcgctctatcggtggtaacgccatc
gctacggcgagtgtcgagatgatagtgccaaccccattcctggatgaggcctacactaac
tcggtgcgtaccagcttcttcgtcgatgcgggtaacgtttgggataccgagttcgactat
gacgcctatcgcttcctgccggctgagcagtttgacaagttgtctgactattccgaccca
gggcgtatccgcgcgtcggcggggatgagcgtacaatggttgtcgccaatgggacctatg
gtatttagtcttgcatggccaatcaaaaaatatgaagatgatgacacagagatcttctcg
ttcaacattggtaaaactttctaa
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