Shewanella halotolerans: K0H81_06525
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Entry
K0H81_06525 CDS
T09172
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shao
Shewanella halotolerans
Pathway
shao03030
DNA replication
shao03430
Mismatch repair
shao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H81_06525 (dnaE)
03430 Mismatch repair
K0H81_06525 (dnaE)
03440 Homologous recombination
K0H81_06525 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shao03032
]
K0H81_06525 (dnaE)
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_06525 (dnaE)
Enzymes [BR:
shao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0H81_06525 (dnaE)
DNA replication proteins [BR:
shao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0H81_06525 (dnaE)
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0H81_06525 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QYJ91233
LinkDB
All DBs
Position
1495207..1498680
Genome browser
AA seq
1157 aa
AA seq
DB search
MSEPRFVHLRVHSDFSMSDGLAKVKPILAKASEDQMAALALTDNTNLCGLVKFYGGCHGA
GIKPIVGCDFFMLVPGFEDEFCSLTVLAMNNEGYKNLTLLISDAYLRGHVKDRAVIDQAW
LERYSEGLILLSGAKDGDVGKALLKGNQGQVDSLVAFYQTHFPDRYYLELIRTGRPDEER
YLHMAVELAGEKDLPVVATNQVVFIQPEQFEAHEIRVAISDGFTLADPRRPRRYSEQQYF
RSQDEMCELFDDIPEALQNSVEIAKRCNVTVRLGEYFLPNFPTGDLSIEDFLVEVSKKGL
EERLEFLFPDEAERAERRGEYDERLDVELTVINNMGFPGYFLIVMEFIQWGKDNGIPIGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAE
LYGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKMIPAEPGMTLAKAFEAEPA
LPEAYDADEEVKDLIDMCRVLEGVTRNAGKHAGGVVIAPTVITDFAPLYCDAEGHNPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALQMINPHLAKQGKEPVRIEAIVLDDPASFRLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGREE
VSYPDQQWQHESLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
QFMAAVMSADMDNTDKIVTLVDECERMGLPLLPPDVNKGLFRFTVDDDLNIVYGIGAIKG
VGEGPVESILKAREDGPFVDLFDFCARVDLKKLNRRVIEKLICAGALDNLGPHRAAMMAT
LPEAIRAADQHAKAEAIGQHDMFGLLNSEPEDNKQQFVQCTPWPDKVWLEGERETLGLYL
TGHPINQYLKELKHYTSGRLKDVHPTERGKTTKAAGLVVATRVMMTKRGSKMGLVTLDDK
SARLEVMLFTEAFEKFGELLEKDRILIVEGEVSFDDFSGGNRMTARNIIDMGEARSHFAH
AVEVDLDGASITPEWLGQFQQAVEPWKAGSVPLVINYAQPTAKAQFRLGDEWRVNPTDEL
MLALETLTGSDKVRILF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacctcgtttcgtgcacctgcgcgtacatagtgatttttccatgtctgatggc
ctcgccaaggtcaagcccattctcgccaaggccagtgaagatcagatggccgcactggcc
ctgaccgacaacaccaacctctgcggtctggtgaagttttatggcggctgtcacggtgcg
gggatcaagcccatcgtaggttgtgacttcttcatgctggtgccgggtttcgaggatgaa
ttctgctccctgactgtgctggcgatgaacaacgaggggtataagaatctgaccctgctg
atcagtgatgcctacctgcgcggccatgtgaaagacagggcggtgatcgaccaggcctgg
ctggagcgctacagcgaagggctgatcctgctctctggtgccaaagatggcgacgtgggc
aaggcgctgctcaagggtaaccagggccaggtggactctctggtcgccttctatcagacc
cacttccccgaccgttattatcttgagcttatccgcaccggtcgccccgatgaggagcgt
tatctgcatatggcggtcgagctggcgggcgagaaagacctgcccgtggtcgccaccaat
caggtggtgttcatacagcctgagcagttcgaggcccatgagatccgcgtggccatctct
gacggtttcaccctggccgacccaaggcggccgcgccgctacagcgagcagcaatatttc
cgcagccaggatgagatgtgcgagctgtttgacgatatcccagaggcgctgcaaaacagc
gtggagatcgccaagcgctgtaacgtcacagtgagactcggtgaatacttcctgccgaac
ttccccaccggcgatctttccatcgaagattttctggtcgaggtctccaagaagggcctg
gaggagcgtctcgagttcctctttcccgatgaggcggagcgcgccgagcgccgcggtgag
tatgacgagcgtctcgatgtcgagctgacggtaattaacaacatgggattccccggctac
ttcctcatcgtgatggagttcatccagtgggggaaagacaacggtatccctatcggtccc
ggccgtggttcgggggcgggttctctggtggcctatgccctgaagatcaccgacctcgac
ccgctggaatttgacctgctgttcgaacgtttccttaacccagaacgtgtttccatgccg
gacttcgacgtcgacttctgcatggacagacgcgacgaggtgatcgatcacgtggccgaa
ctctatggccgcgacgccgtgtcacagatcatcaccttcggtaccatggcggctaaggcc
gtggtacgtgacgtgggccgtgtactgggtcacccctatggcttcgtcgaccgcatctct
aagatgatcccggccgaacccggcatgaccctggccaaggcgttcgaggccgaaccggcg
ctgccggaggcctatgatgccgatgaagaggttaaagatctcatcgacatgtgccgggtg
ctggaaggggtcacacgtaacgcaggtaaacatgccgggggcgtggtgatcgcgccgacg
gtgatcaccgattttgcgccgctctactgtgatgccgaggggcacaacccggttacccag
ttcgataagaacgacgtagaaaccgccggtctggtgaagttcgacttcctgggtctgagg
accctgaccatcatcgactgggcgctgcagatgatcaatccgcatcttgcgaagcagggc
aaagagcctgtgcgtatcgaggcgatcgtcctggatgacccagcctccttccgtttgttg
cagcgttatgaaaccaccgccgtgttccagctggaatcacgcggcatgaaagatctgatt
aagcgcctacagcctgactgcttcgaagatatgatcgcactggtggccctgttccgtccc
gggccgctgcaatcgggcatggtagataacttcatcgagcgtaagcacggccgtgaagag
gtttcttatcccgaccagcaatggcaacacgagagcctcaagccgattctggagcccacc
tacggcattattctctaccaggaacaggtgatgcagatcgcccaggtgctggcgggctat
accctgggcggcgcggacatgctgcgtcgtgccatgggtaagaagaaacccgaggagatg
gccaagcagcgtagcgtcttcaaagaaggtgcggtgaagaacggcgtcgacggcgagttg
gcgatgaagatcttcgacttagtggaaaagttcgccggttacggcttcaacaagtcgcac
tcggccgcctacgccctggtgtcctaccagaccctctggctcaagacccatttcccggcg
cagtttatggcggcggtgatgtcggcagatatggacaacacggacaagatcgtgaccctg
gtggatgagtgtgagcgcatgggcttgccgctattgccgccggacgtcaacaagggcttg
ttccgtttcaccgtggatgacgacctcaacatcgtctatggcatcggcgccatcaagggc
gtgggtgaaggtccggtggaatcgattcttaaggcgcgggaggatgggccattcgtggac
ctgttcgacttctgcgcccgggtcgatctcaagaagcttaaccgcagagttatcgagaaa
ctgatctgcgccggcgccctggataacctggggccgcaccgtgccgccatgatggcgacc
ctgcctgaggcaattcgcgccgccgatcagcatgccaaggccgaggcgattggtcagcac
gacatgttcggcctgctcaatagcgagcctgaagataacaaacagcagtttgtgcaatgt
accccctggcccgataaggtgtggctcgagggcgagcgagagaccttaggtctgtatctg
accggtcacccgattaaccaatacctcaaggagctcaagcactacacctcgggcaggctc
aaggatgtgcatcctaccgagcggggcaagaccaccaaggccgccggtctcgtagtggcg
acccgtgtgatgatgaccaaacgcggctccaagatgggtctggtcactctggatgataag
agtgctcgcctggaggtgatgctgtttaccgaggcctttgagaaatttggtgagctgctg
gaaaaagacagaatcttgattgtcgaaggggaggtgagtttcgatgacttctccggcggc
aatcgcatgacggcccgcaacatcatcgatatgggtgaggcgcgcagtcacttcgcccac
gcggtcgaggtggatctggacggcgccagtatcacgccagagtggctcgggcagttccag
caggcggtcgagccctggaaggcaggcagtgtccccttagtgatcaactatgcccagccc
accgccaaggcccagttcaggctgggggatgagtggcgggtgaatccgaccgacgagctg
atgttggcgctggaaacgctgacaggctcggataaggtaaggatcctcttctag
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