Shewanella halotolerans: K0H81_07365
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Entry
K0H81_07365 CDS
T09172
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_07365
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H81_07365
Archaeal homologous recombinant proteins
K0H81_07365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QYJ91386
LinkDB
All DBs
Position
1701695..1704751
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLRLTMTAFGPFADEQTIDFSALGSNPLFLINGPTGAGKTTILDAICFALYGKTTGDE
REGTQMRCDMADEQKLTQVSFEFELGSTRYLIRRVPEQPRAKKSGDGVTLQKSEAQLSRF
EQDGSETLLVAAKVSDATAQIEQLTGLDVDQFRQVMVLPQGKFRELLMADSKAREKIFSQ
LFQTHIYRRIEERLKQQAAGIRRDVEAMRNRRGGILEGASLESDQALMEEQALIAPELEL
AQAQKQQAEQALLTANQNLDKGLKLQSDFNRLQALQSEGEGLKARQLEATLWQQRLQAAG
RANSLSPLYRAMQSRLGEQRSASQHLGECQQIQASAEQALNQSQQAFEQLGALEQEQLSQ
QQRLTQLEALAPQLEQLNQLNQRLADGQAKMQAAEASGKQSAKQLDELNQARQEMVSRRE
TLKRDAEPQLALQQFLSDGRAQLKVFERWQQQGQEIAALEQKLLAAKTAGSELAEKHQQA
IDAHKRLELSWHRGQAARLAAELSPGEPCPVCGSLEHPEPAMGEFDLPSDEALASAKQRE
SDALNLLHQARSEYKLLQQSLSSLQLSASQLQEELGEAADLSFDEHQARLVDLSDGFERA
KAAQQSLAQLETQLERSEHQGRELQTALDEARAHYGKLAEQLASDKGQYQQISAAIPQGF
SDLATLSTAIAELTKSIAELKARQQSVRAAHAKAEQDNAAAKASMEAASRRLGEVNALAE
QETLSFQQALAASEFESVAAFEQACLTEAEQAELSNQIKAFEQALITHQANLSQLQEALA
GCEAPDNSALEQQKMDAEQVMQQALAQWQKLSARAAQLHQTQEQLKALDLKAGALEQQYS
VVGTLADVANGNTGNKISLQRFVLSVLLDDVLLEASHRLQLMSKGRYRLLRKEERAKGNK
ASGLELEVEDAYTAKVRSVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMVGVISHVTEMKEQIASRIDILKSAEGSEIKLVLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagaccactgcgactgaccatgaccgccttcggccccttcgccgacgagcagaccata
gacttttccgccctgggcagtaacccgctgtttctgatcaacggccccacgggggcgggt
aagacgacgattctcgatgccatctgtttcgccctctatggcaagaccacgggggatgag
cgcgaaggcacccagatgcgctgcgacatggccgatgagcagaagctgactcaggtcagc
ttcgagtttgagctgggcagcacgcgttatctcattcgccgcgtccccgagcagccaagg
gccaagaagagtggtgatggcgtgacgctgcaaaagagcgaggcccagctgtctcgcttc
gaacaagatggcagcgagaccctgctggtggcggccaaggtgtctgatgctaccgcgcag
atagagcagttaaccggcctggatgtggatcagttccgtcaggtgatggtgctgccccag
ggcaaatttcgcgagctcttgatggccgactctaaggctagggagaagatcttcagccag
ctgtttcagacccacatctatcgccgcatcgaggagcgcctcaagcagcaggctgccgga
attcgccgcgacgtcgaggcgatgcgtaatcgccgtggtggcattctggagggcgcttcg
cttgagagcgatcaggcgcttatggaggagcaggcgctcatcgcgcccgagctggaactc
gcccaagcgcaaaagcagcaagccgagcaggcactgctgacggccaaccagaatctggac
aagggcctcaagctgcagagtgatttcaatcgcctgcaggcgctgcaaagcgagggcgag
gggctcaaggcccgccagcttgaggcgactttgtggcaacagaggctgcaggcggccggt
cgagccaatagcctgagccccctttaccgggcgatgcagtcccgcctcggcgagcagcgc
tcggcaagccagcacttaggtgagtgtcagcagattcaagcaagcgccgagcaggcattg
aatcagagccagcaagcattcgagcagctgggcgcgctcgagcaagagcaattgagccag
cagcagcgcttgacccagctcgaggcactagcgcctcagcttgaacagctcaatcaactg
aaccagcgactcgccgatggccaggctaagatgcaggcggccgaggcgagtggtaagcag
agcgccaagcagctagacgagcttaatcaggcccgtcaggagatggtgagtcgccgcgag
accctaaaacgtgacgccgagccccagctcgcgttgcaacaatttctaagcgacggccgt
gcccagctcaaggtgtttgagcgctggcagcagcaggggcaggaaatagcggcgctcgag
cagaagttattggcggctaagacagcaggcagtgagcttgccgaaaagcaccagcaggcg
atcgatgcccataagcgtctggagcttagttggcatcgcggtcaggcggcgcgcctggcg
gcagagttatcgccaggcgagccttgccccgtctgtggcagcctggaacacccagagcct
gccatgggcgaatttgacctgccgagcgacgaggcgctggcgagcgccaagcagcgagag
agcgacgcgctcaatctgctgcatcaggccagaagcgagtataagctgctccagcaatcc
ctttcgagcctgcagctaagtgcatctcagctacaagaggagcttggcgaggcggcagac
ttgtcgtttgatgagcatcaggcgcgacttgtagatctaagcgacgggttcgagcgggcc
aaggcggcgcagcaatcacttgcccagctagagactcagcttgagcgcagcgagcaccag
ggacgagagctacaaaccgcgctggatgaggcgcgtgcccactacggcaaactggctgag
cagctggccagcgacaaggggcagtatcagcagataagcgcggccattccacagggcttt
agcgacctggcgacgctcagcacggccattgctgagcttaccaagtccatcgcagagctt
aaggcgcgccagcaatcggtgagggcggcccatgccaaggcggagcaggacaacgcggcg
gccaaagcttcgatggaggcggccagccgtcgtcttggtgaggtgaatgccctagccgag
caggagaccctgagtttccaacaggcgctagcggcttcggaatttgaaagcgttgccgcc
ttcgagcaggcctgcctgaccgaggccgagcaggccgagctgtccaatcagattaaggcg
ttcgagcaggcgcttatcactcatcaggccaacctgtctcagctccaagaggccttagcc
ggttgtgaggcgccggataatagcgcgctcgagcagcaaaaaatggacgccgagcaggtg
atgcagcaggccttggctcagtggcagaaactgagcgccagggcggcgcagctccaccag
acccaggagcagcttaaggcgctggatcttaaggctggcgctctcgagcagcaatacagc
gtggtcggcaccctagccgatgtggccaatggcaacacgggtaataagataagcctgcaa
cgcttcgtgctgagcgtattgctcgacgatgtcttgctggaagccagccacaggctacag
ctgatgagtaaggggcgctatcgtctacttcgtaaggaggagcgggccaagggcaacaag
gcctctggtttggagctggaggtggaagatgcctacaccgccaaggtgcgctcagtggcg
accctgagcggcggcgagagctttatggcggctctgtccatggcccttgggttgtcggat
gtggtgcaggcctatgccggcggcattaagctcgataccctgtttatcgacgagggcttc
ggtagcctggatcaggactctctcgagctggccatcagaaccttgatggatctgcaatcg
gccggtcgcatggtgggggtgatctcccacgtgaccgagatgaaggagcagatcgctagc
cgcatcgatatccttaagagtgccgagggtagcgagattaaattagttttaccttaa
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integrated database retrieval system
