Shewanella halotolerans: K0H81_07975
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Entry
K0H81_07975 CDS
T09172
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shao02022
]
K0H81_07975
Two-component system [BR:
shao02022
]
NtrC family
Unclassified
K0H81_07975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA
AAA_16
HTH_50
AAA_5
AAA_2
HTH_30
nSTAND1
nSTAND3
DUF6507
Motif
Other DBs
NCBI-ProteinID:
QYJ91495
LinkDB
All DBs
Position
1859571..1860923
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AA seq
450 aa
AA seq
DB search
MEQPKLHILVVEDEPDQRALIVQMLTANQYLVESADSVEQAIVMIKASAPDLVFSDWKLG
QLTGMDLLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKV
AKSIALKRQNRRLSSELSQQQELVGLVGRSALMQKVYQRVQRVSATDATVLIGGESGTGK
ELAARALYQLSGRSHKPFVAINCGAIPESLAEAELFGAEKGAYTGANTQKIGKLEAADGG
TVFLDEIGELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDLQQEVAEGRFR
EDLYYRLNVVPIHMPALRERPEDIGRLVEHFLKLHANQYGMEVPKLSRDTLKSLLDHSWP
GNVRELANRIERFVLLGDEEEMVQELGAAPQPLDTRRFVLPEAGIEWESFEKDCLRQALD
RFEGNRTKAAKCLGLSYKAFLYRLEKYQLV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcctaagttgcatattttggtggttgaggatgagcctgatcagagagcattg
atcgtacagatgttgacggccaaccagtatttggtggagagtgccgacagcgtcgagcag
gcgattgtgatgattaaggcatcggcaccggatctggtgttttccgactggaagctggga
cagttgactgggatggatctgcttaattatgtgcgccgcgaacatcccgatatgggcttt
atcatcgccaccgcctacggcaccatcacccacgcggtggatgccatgcaggcgggggca
gatgactatctggccaagccctatcagcgccagagtctgctgttggccatcgaaaaggtg
gccaaatctatcgcccttaaacggcagaaccgtcgtctctcttccgaactgtctcagcag
caggagctggtggggctggtggggcgctccgccttgatgcagaaggtgtatcagagggta
cagcgggtgagcgccacagatgcgaccgtgctgattggcggcgagagtggcacgggcaag
gagctggcggcgcgagcgctttaccagctgtcgggccgtagccataagcccttcgtcgct
atcaactgcggcgctatcccagagtctctggccgaggcggagctgttcggcgccgagaag
ggggcttacacgggggccaatacccagaagataggtaaactggaggccgccgatggcggg
acagtttttctcgatgagataggcgaactgcccctgctgcaacagaccaagctgctgcgt
ttcttgcaagagggggtgatatcccgtctcgggcagaacagcgagatcaagctggatgtc
agggtgattgctgcgacccatagggacctgcaacaggaggtggccgaggggcgttttcgt
gaggatctctattaccgcctcaatgtggtgcctatccatatgccggcgctccgggagcga
cccgaggatatcggccgactggtggagcactttcttaaacttcacgccaatcaatatggc
atggaggtgcccaagttaagccgggataccttaaagtcgctgctagaccatagctggccg
ggtaacgtgcgcgagctggcgaatcgcatcgaacgtttcgtgttactcggcgatgaagag
gagatggtgcaggaactcggcgccgcgccgcagccgctggataccaggcgttttgtcttg
cccgaggcgggtatcgagtgggagagtttcgagaaggattgcctgcgtcaggccctggac
cgtttcgaaggcaatcgcaccaaggcggctaagtgtttaggcctgagctataaggccttt
ctctatcgcctggagaaatatcagctggtctag
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