Shewanella halotolerans: K0H81_09000
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Entry
K0H81_09000 CDS
T09172
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
shao
Shewanella halotolerans
Pathway
shao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0H81_09000 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_09000 (recC)
Enzymes [BR:
shao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0H81_09000 (recC)
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H81_09000 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
mRNA_triPase
Motif
Other DBs
NCBI-ProteinID:
QYJ91686
LinkDB
All DBs
Position
complement(2115739..2119341)
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AA seq
1200 aa
AA seq
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MLYLVQSNRMEALAELLANELQTPLPGQSPLSNEQILVQSPGMSTWLRLAIAKQNQVAAA
LEFPLPSSFIWQLCHQLLPDVPKENAFTKPAMTWKLMELLPDLLSLEVFAPLANYLKDDA
ILTDSAAPHSLKLFQLCSQIADIFDQYLVYRPDWILAWEQGEDRLPPKERPLAANQQWQS
LLWRELIHYNHHTLNQSRYHRANLHQALFDALSDPQCDLSKLPPRLFVFGISSMAPQTLE
VLYFLAKRIDVVMLNLSPCQHYWGDIVDPKLRARMALQYGDKQQLAIDWESKLEVGNPLL
ANNGKMGRELLDLILELPENDTNFNFECYQDPGSNTLLHGVQQDILELCTRGETLGPDAE
LYLTTNGRRVLKNDDDSLTLRSCHSPLRELETLHDHLLEQLSQSDGLAPKDIVVMMPDVA
AYAPYIDAVFASKRGDHFIPYAIADRGAAQESPLINSFLHLLDLNKSRFALTDILGILEV
PAVMRRFDLDDDDLLLIRRWLEQAGVRWGRDQHSRQAQQLPAFEHNSWAFGIKRLILGYS
FSDEAPIYHDSLALPGVEGQSAQALGKLLNFIEAIDEFNLALGEHCPLSVRITQLQTLVE
TFYDCVDEELSQKQELLQAITRLSEELTATQYQSELELEVMQNWFTRHLTESRVGQRYLA
GSVNFCTLMPMRSIPFKLVCLLGMNDGVYPRVQHPVGFDLVAQEGPRKGDRSRRLDDRYL
FLEALLSARKQLYISYIGHSERDNSERIPSMLVSELIEYCQLCYLPENCAHLLNTASEDD
TNTVDIAKIEQAILDQLIITMPLQPFDERLYLADESEGAECEGAKSEPRRLRQSYSEQWC
PSALAEQDKRLDDKPASASHFIEAPLTLVADEDKGEPLELSALIRFYRNPAQYFFNRTLK
LDLNLSIQADENDEPFALNPLSRYQLQSTLIEDAVKSGDERPSSKLLERLRLSGQLPLAP
FDDLLLKQYQHDIRALVGRTLYLQGESCHTQDINLLLGDSAATALVGRIDGVSAKGLVNY
RPGTANARDLIRVYLRHLCLNASLNTSLNTSLNASVSENSDVEIHEGTPWQRHSYLLDIG
HFHAFAPITPEQALNQLSLWAERYHQGQSQPLPFMPRTAFAYVEAEGDHIEKLIAAQPQW
LDEQSNLGEGQEAHYQRLFTFPDDFSEAGFGTIASTLLSPMLSLYHKAPLSELADFVEGQ
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatttggtgcaatcgaatcgaatggaggctttggcagagctgctcgccaacgag
ctacagacgcccctgccgggtcagtcgccgctgagcaatgagcagatcttggtccagagt
cccggcatgtccacctggctcaggctcgccatcgccaaacaaaaccaggtcgcggcggcg
ctagagttccccttgccgtcgagctttatctggcaactctgccaccagctgctaccggat
gtccccaaggagaacgcctttaccaaaccggccatgacctggaagctgatggagctgctg
ccagacctcttgtctctggaggtgttcgccccgctggcaaactatctgaaagacgatgcc
atactcacagacagcgcggcgccgcactcattaaaactgtttcagctttgcagccagata
gccgacatcttcgaccaatacctggtctatcgccccgactggatcttggcttgggaacag
ggtgaggatcgacttccccccaaggagcgcccgctagcggccaaccagcagtggcaaagc
ctgctctggcgcgaacttattcactacaatcatcacacgctgaaccagagccgctatcac
agggcgaacctgcaccaggcgctgtttgatgccttaagcgatccccagtgcgatcttagc
aagttgccgccgcgcctgtttgtctttggtatctcctccatggcgccgcagaccctggaa
gtgctctactttttggccaaacggatcgatgtggtgatgctcaacctaagcccctgccaa
cactattggggcgacatagtagatcctaagctcagggcgcgaatggcgctgcaatatggc
gacaagcagcaactcgccatcgattgggagagtaagctcgaggtaggcaatcccctgctg
gccaacaacggtaagatgggccgcgagctgttagaccttatcctggaactaccggaaaac
gacaccaacttcaacttcgagtgctatcaagatccgggctcaaacaccctgctccacggc
gtgcagcaagatatcctagagctttgcacccgcggcgaaaccctaggaccggacgccgaa
ctctatctcaccaccaacggcagacgagtacttaagaatgacgatgattccctgaccctc
aggagctgtcacagcccactacgggaacttgagacactgcacgatcatctgctggagcag
ttgtcgcaatcggatggtctcgcccccaaagatatcgtagtgatgatgccagatgtggcg
gcctacgcaccctacatagatgcggtatttgcctccaaacgcggcgatcattttatccct
tacgctatcgccgatcgcggcgcggcacaggaatcacctctgatcaacagcttcctgcac
ctgctagatctcaacaagagccgcttcgccctgacggacatcttaggcatactcgaggtg
cccgccgtgatgcgccgcttcgatctggacgatgatgatctcctgcttatccgccgctgg
cttgaacaggcgggcgtgcgctggggacgggatcagcacagccgtcaggcgcagcagttg
cccgccttcgaacacaactcctgggcctttggcatcaagcggctgatcttgggctatagc
ttcagcgatgaggcacctatctatcatgacagcctggcgctcccaggcgtcgaagggcaa
tcggcccaggcactgggtaagctgctcaactttatcgaggcgatcgacgagtttaatcta
gcgcttggcgagcattgccccttaagcgtgcgcattactcaactgcagaccctggtagag
accttctacgactgcgtcgatgaggagctgagtcagaaacaggagcttttacaggcgatc
acccgtctgagtgaagagctcactgctacacagtatcagagcgaactcgaactcgaagtg
atgcagaactggtttacccgtcacctcaccgagtcccgggtgggacagcgctacctggcc
ggtagcgtcaacttctgtaccctgatgccgatgcgctccatcccctttaagctggtctgt
ctgctgggcatgaacgatggtgtttaccccagggtacagcacccggtaggcttcgacctg
gtagcgcaggaagggccacgtaagggagaccgttcccgcaggctggatgacagatacctg
ttccttgaggcgctgctctctgccagaaagcagctctacatcagctatatcggccatagc
gagcgggataacagtgagcgcatcccctctatgttagtgtcggagcttatcgaatactgc
cagctctgctatttgccagaaaattgtgcccacctgcttaatacagctagtgaagatgac
acaaacacggtagatatcgccaaaatcgagcaggccatcttagaccagctaatcatcacc
atgccgctgcagcctttcgatgaacgcctctatctggcagacgagtctgaaggcgcagag
tgtgaaggcgcaaagagtgagccaagacgtcttcgccagagctatagcgagcagtggtgc
cctagcgcccttgctgagcaggataagcgcctcgatgacaagccagcaagtgctagtcat
ttcatcgaggcgccgctgactctggtcgccgatgaagataagggcgagccgcttgagctc
tcggcgctgatccgtttctaccgtaatccggcgcagtattttttcaatcgcaccctcaag
ctggatcttaatctcagcatacaagcggatgaaaacgatgagcccttcgccctcaatccc
ctgtctcgctatcagctgcaatcgaccctgatagaagatgcggtcaagtcaggcgatgag
cggccatcgagtaagctactagagcgcttgcggctctcgggtcaactgcccctggcccca
tttgacgatctcctgcttaaacagtatcagcacgatattcgcgccctggtcggtcgcacc
ctctatctgcagggtgagagctgccatacccaggatatcaatcttctcctgggcgatagc
gccgccacggctttagtggggcgaatcgacggcgtcagcgccaaggggctggtcaactac
cgtccggggacggcgaacgcgcgggatctgatccgcgtttatctgcgtcacctgtgcctt
aacgctagtcttaacaccagtcttaacaccagtcttaacgccagcgtcagcgaaaatagc
gacgtggaaatccatgagggcacaccctggcagcgccacagctatctgctcgatatcggc
catttccacgcctttgcgccgataacgccagagcaggcgctcaatcagctctcactctgg
gccgagcgctatcatcaggggcagagccagcccctgcccttcatgccaagaaccgccttt
gcctatgtcgaagccgagggagatcatattgagaagctgatcgccgcccagccacaatgg
ctcgatgaacaatctaacctgggtgaaggccaggaagctcactatcagcggttatttact
ttccctgatgattttagcgaggcaggctttggcaccatagccagcacgctgctctcaccc
atgctgagtctttatcacaaggcgccgctgagcgagttggccgatttcgtggagggccaa
taa
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