Shewanella halotolerans: K0H81_11880
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Entry
K0H81_11880 CDS
T09172
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shao03009
]
K0H81_11880 (rluC)
Enzymes [BR:
shao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
K0H81_11880 (rluC)
Ribosome biogenesis [BR:
shao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0H81_11880 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TGS
RluD_N
FHA
Motif
Other DBs
NCBI-ProteinID:
QYJ88517
LinkDB
All DBs
Position
complement(2772971..2773930)
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AA seq
319 aa
AA seq
DB search
MNSQQALNKVELVTIDEDHLGQRIDNFLVTKLKGVPKSMIYRIVRKGEVRVNKKRIKPEY
KLQDGDVVRIPPVRVSSSDDKPGPSAKLTKVSQLEGRILFEDKAIIVLNKPAGIAVHGGS
GVDFGVIEAMRSLRPQQKFLELVHRLDKETSGVLLIAKKRSALKHLHDQLRYKKMQKDYM
ALVRGEWQNHDKVINAPLLKLTLKSGERIVRVNQEGKPSETRFKVMQRYQGATLVQASPV
TGRTHQIRVHCQYAGHPIACDEKYSEQKFDDAMRELGLNRLFLHAAQLKFTHPVTEEVMQ
VKAPLDKALQDLLNKLDKA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtcaacaagcgttaaataaggtcgagttggtcaccatagatgaggaccatttg
ggccagcgaatcgataactttctggtcactaaactgaagggcgtccccaagagcatgatc
tatcgtatcgtgcgcaagggcgaggtgcgcgtcaacaagaagcggatcaagcccgaatat
aagctgcaagacggcgatgtggtacggatcccgcctgttcgcgtatccagcagcgatgac
aagcccggaccgagtgctaagttgaccaaggtgtcccaactcgaggggcgtatcctgttt
gaagataaggccatcatagtgctaaacaagcccgcaggcattgctgtgcatggtggcagt
ggtgttgattttggcgtgatcgaggcgatgcgttcgctcagaccgcagcagaagtttctc
gaactggttcaccgcttggataaggaaacctcgggcgtcttgttgatcgccaagaagcgc
agcgcgcttaaacacctgcacgatcagctgcgttacaagaagatgcagaaggattacatg
gccttggttcgcggtgagtggcaaaaccatgacaaggtgatcaatgcgccgctgctgaaa
cttaccctaaagtcgggcgagcgtatcgtgcgggtcaatcaagagggtaaaccctcggaa
acccgttttaaggtgatgcagcgctaccagggggccaccttggtacaggccagtccggtt
accggacgtacccatcagatccgggtgcattgccagtatgccggtcaccccatcgcctgt
gatgagaaatacagcgagcagaagttcgatgatgccatgcgcgagttagggctcaatcgt
ctctttcttcatgctgcccaactgaaattcacccatccagtgaccgaagaagtgatgcag
gtgaaggcgccactggataaggcactacaagacttattgaacaaattggataaggcatga
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