Shewanella halotolerans: K0H81_12475
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Entry
K0H81_12475 CDS
T09172
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_12475 (phrB)
Enzymes [BR:
shao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K0H81_12475 (phrB)
DNA repair and recombination proteins [BR:
shao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K0H81_12475 (phrB)
Prokaryotic type
K0H81_12475 (phrB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYJ88625
LinkDB
All DBs
Position
complement(2892382..2893818)
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AA seq
478 aa
AA seq
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MSALLWLRRDFRLHDNPALSEAVRLGVKQAIFIATPTQWQQHDMAPIKADLIRRHLELMA
GELSQYGIELVILSATDFSDQVRALCDYCREHSVNLLLANSEPELDEQERDKQVMTAGID
LRLWQNDTILPPGSVLNQQGEMFKVFTPFKKAWLKCVAAKGIECVPTPAKSTPAKSIGDA
QAASQLPQQPTLQSSSINLDYPLVDSSRWPDSEQVMSQLLPHFWQDKLLNYGERRDFPAI
KGTSGLSPYLAIGAISSRWLALQLVQRHPEVIYDIQHGAFTWLNELIWRDFYKHLLFHYP
ELIKGRSFQPKYESLPWPNNEDHFQAWCEGRTGYPIVDAAMKQLRRTGWMHNRLRMIVAS
FLTKHLLVDWHKGERFFMQQLIDGDFSANNGGWQWAASTGCDAQPYFRIFNPITQSQKFD
PRGDFIRKYLPELSEVPDKQIHFPHDYLASQGKAEIYPAPIVDHKAARQRALAFYKVE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcactcttgtggctgagacgggatttccgtctccatgataatcccgccttgagt
gaggcggtgcggctcggggtgaaacaggcgatctttatcgccaccccgacccagtggcag
caacatgatatggcgccgataaaagccgatctcattcgtcgtcacctcgaactgatggcc
ggtgagttatcccagtacggaatcgagctggtcatcttgtctgccacagattttagcgat
caggtgagggccctatgcgactactgccgcgagcatagtgtcaacctgctgctggccaac
agcgagcctgagctcgatgagcaggagcgcgataaacaggtaatgacggcggggatagat
ctgcgcctgtggcaaaacgataccatcttgccgccgggtagcgtgctcaaccagcagggg
gagatgtttaaggtctttacccctttcaagaaggcctggctcaagtgtgtggcggcgaag
ggcatagagtgtgtgccgacgccggccaaatcgacgccggcaaaatcgatcggtgatgct
caagcagcgtctcagcttccccaacagccaacactacaatcatcaagcatcaacctagat
tatcccctggtggactccagccgctggcccgacagcgagcaggtgatgagtcagctgctg
ccccatttctggcaagacaagctgctcaattatggcgagcggcgcgactttccggccatc
aaggggacatcaggcttgtcgccttatctggccataggggcgattagctcgcgctggcta
gcgctgcaactggtgcagcgtcatcccgaggtgatctacgacatacagcacggcgccttc
acctggctcaacgagctgatctggcgggatttttacaaacatctattgtttcactatcca
gagcttatcaagggcagaagctttcagcccaagtacgagtcgctgccctggcccaataac
gaggaccactttcaggcctggtgcgaggggcgaaccggttatcccatagtcgatgcggct
atgaaacagctgcgccgtaccggctggatgcacaatcgcctgcgcatgatagtggcgagt
tttctcaccaagcatttgctggtggactggcataagggggagcgcttcttcatgcaacag
ctgatcgatggcgatttcagtgccaacaacggcggctggcagtgggccgccagcacgggc
tgcgatgcccagccctattttaggatctttaaccccatcacccagagtcaaaagtttgat
cctcggggtgacttcatccgtaaatatctaccagagttgagcgaggtgcccgacaagcag
atccactttccccatgactatttagcgagtcagggcaaagctgagatctaccctgcgccg
atagtggaccataaggcggcgcgccaaagggccctggcattttataaggtggaatag
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