Shewanella halotolerans: K0H81_13235
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Entry
K0H81_13235 CDS
T09172
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
shao
Shewanella halotolerans
Pathway
shao02020
Two-component system
shao02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0H81_13235
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K0H81_13235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shao02022
]
K0H81_13235
02035 Bacterial motility proteins [BR:
shao02035
]
K0H81_13235
Two-component system [BR:
shao02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
K0H81_13235
Bacterial motility proteins [BR:
shao02035
]
Flagellar system
Flagellar assembly proteins
Others
K0H81_13235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA_16
AAA_19
HTH_24
MerR
AAA
AAA_14
MCM
HTH_11
AAA_3
AAA_7
nSTAND3
NB-ARC
FleQ
Sigma70_r4_2
NPHP3_N
AAA_22
HTH_23
HTH_3
nSTAND6
HTH_50
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QYJ88746
LinkDB
All DBs
Position
complement(3048937..3050280)
Genome browser
AA seq
447 aa
AA seq
DB search
MAEAKILLVEDDASLREALVDTLLLAQYDCVDVESAEAAIVALKGQEFDMVISDVQMEGI
GGLGLVNYLQQHNAQMPILLMTAFATIDSAVSAIKLGAVDYLAKPFAPEVLLNQVSRYLK
PKLIEDQPVVADERSLALLALAQKVAQSDASVMIMGPSGSGKEVLARYIHQHSQRASEPF
VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMDLGLQAKL
LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKAMATKGDFREDLYYRINVFPLTWPALH
QRPADILPLARHLVLRHAKAAGLAVAPSLDDQASRRLLGHRWPGNVRELDNVVQRALILQ
TGDTICAKDIVIDTQDVMLEPIFESEKVAEPEGLGDELKAQEHVIILETLNQCNGSRKQV
AEKLGISARTLRYKMARMRDMGIQIPA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccaagatattactcgttgaagatgatgcgtcgctgcgcgaagccctagtc
gataccttgttgctggcgcagtatgactgtgtcgatgtggaatcggccgaggcggccatc
gtcgcgctcaagggccaggaattcgacatggtgatcagcgacgtgcagatggaggggata
ggcggcctagggctggtgaactatcttcagcagcataacgcccagatgcccatcttattg
atgacggcttttgccaccatagacagtgcggtaagtgccattaaactcggcgcggtggac
tatctggcgaaacccttcgcccctgaggtcttgctcaaccaagtgtctcgttatctcaaa
cctaagcttatcgaagatcaacctgtggtggccgacgagcgtagcctggcactcttggcg
ctggctcagaaggtggcccaatccgatgcctctgtgatgatcatggggccgagtggctcg
ggtaaagaggtgcttgcccgctatattcatcaacacagccagcgtgccagcgagccattt
gtggcaatcaactgcgcggcaattcctgaaaatatgctcgaagccacactgtttggctac
gagaagggggcctttactggggcctatcaggcctgtcccggtaagtttgaacaggcccag
ggcggaaccttgttgctcgatgagatctccgagatggatttggggctgcaggccaagctg
ctcagggtgttgcaagagcgagaagtcgagcgactcggcggccgtaagacgatcaaactc
gatgtgcgagtgctggccacctctaaccgagatcttaaggcgatggcgaccaaaggcgat
tttagggaagacctctattaccgcatcaatgtgttcccgctgacctggccggcgctgcat
caacgcccggcggatatcttgccgctggcgaggcacctagtgttgcgtcatgccaaggct
gccggtttagccgtggcgccaagcctggacgatcaggcaagcaggcgtctattgggacac
aggtggccgggtaacgtgcgagagctggataacgtggttcagcgcgccctgatcttacag
acaggcgacaccatctgcgccaaggatatcgttatcgatactcaggatgtgatgctggaa
cctatctttgagagtgaaaaggtagccgagcctgaggggctgggggatgagctcaaggca
caggaacatgtgatcatcctagagacccttaatcagtgcaacggcagtcgcaagcaggtg
gccgaaaagctgggtatcagcgcccgaaccctgagatataagatggcgcgtatgcgcgac
atgggtattcagatccctgcctga
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