Shewanella halotolerans: K0H81_13570
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Entry
K0H81_13570 CDS
T09172
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
shao
Shewanella halotolerans
Pathway
shao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K0H81_13570 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_13570 (xseA)
Enzymes [BR:
shao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K0H81_13570 (xseA)
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K0H81_13570 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QYJ88808
LinkDB
All DBs
Position
3125910..3127238
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AA seq
442 aa
AA seq
DB search
MKMPKNNVYTVSRLNGEVRQLLEGELGKVWLEAEISNFSAPSSGHWYLTLKDNYAQIRAA
MFKGRNRAVTFRPANGQQVLVKGAISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKL
AAEGLFAADTKRPLPSNIQRIGVVTSATGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHA
DKSLCHAIMQANDRMEVDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHEVD
TTISDYVADLRAPTPSAAAELLSQDALSKADKLRMAMTRLKQGWQHYGLKQAQRFSQLHH
RLERQDPKRRLQQYEQRFDELQLRLGAALTGKLHQMERRQQSLHARLNQVSPSHQLALAA
SRLSHQNQRLHSAMQARLNSAEKSLQYAAHQLETVSPLATLSRGYSITLDAQGKVLHSAQ
DVRTGDRLTTKLVDGEVQSTVV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgccgaaaaataatgtttacaccgtgtcgcgcctcaatggagaagtgaggcaa
ttactcgagggtgaactgggtaaagtctggctcgaagcggaaatatccaatttttcggcg
cccagctcggggcactggtatctcaccctcaaagacaattacgcccagatccgcgccgcc
atgtttaagggccgcaatcgcgccgtcaccttccgtccggccaatggccagcaggtgttg
gtcaagggcgccatcagcgtctatgagcccaggggcgactatcagctgatcatcgactcc
atgctccccgccggcgatggcctgctggctcagcaatatgaagccctcaagatgaagctg
gccgccgaaggcctatttgccgccgacaccaagcggccgttgccgagcaacattcaacgc
atcggggtggtcacctcggccacgggcgcggccatcagagacgtgctgcatgtactcaag
cggcgcgacccctctatcgaggtgatcatctaccctagccaggtacagggagagcatgcc
gataagtctctgtgtcatgccatcatgcaggccaacgacaggatggaagtggatgtgttg
ctgctcacccgaggcggcggctcactggaagatctctggtgtttcaacagcgaagccctg
gctcataccatctataacagcgccctgcccgtcgtttcggccgtgggccacgaggtggat
accaccatcagcgactatgtcgccgacctgcgtgcccccaccccttcggcggcggccgag
ctgttgtctcaggatgcgctcagcaaggccgacaaactcaggatggccatgacacgcctc
aagcagggctggcaacactatggcctgaaacaggcccagcgtttcagccagctgcaccac
aggttagagcgtcaggatcccaaacgccgcctgcaacaatatgagcagcgctttgacgag
ctgcaactcaggctcggcgccgccttaaccggtaagctacaccagatggagcgccgtcag
cagtccctgcacgccagattaaaccaggtctctcccagccatcaactggccttggccgcc
agccgtctgagccaccagaaccaaagattacacagcgccatgcaggccagactcaactcg
gcagaaaaatccctgcaatatgccgcccatcagctggagaccgtcagcccactggcgacc
ctgagccgtggctatagcatcacactcgacgcacagggcaaggtgctgcacagcgcgcaa
gatgtccgcacgggcgatcgcctcactactaagctggtcgatggcgaggtgcaatcgacg
gtagtttaa
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