Shewanella halotolerans: K0H81_14010
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Entry
K0H81_14010 CDS
T09172
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shao03016
]
K0H81_14010
Enzymes [BR:
shao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K0H81_14010
Transfer RNA biogenesis [BR:
shao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K0H81_14010
Prokaryotic type
K0H81_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SLC35F
Motif
Other DBs
NCBI-ProteinID:
QYJ88885
LinkDB
All DBs
Position
complement(3217992..3219059)
Genome browser
AA seq
355 aa
AA seq
DB search
MTPLHYLHGEPEASADLRTFNSDFIVQEILPFLPTGEGEHHMLHIRKEGLNTADVARMLS
SFAGVHPKEVTFAGQKDRHAITEQWFGVRIPGKSMPDWQSLNSEQLTVLSSARHGKKLRT
GALAGNRFILTLRAVSDMDALVRRIELIKATGVPNYFGEQRFGHDGKNLIFGRQMLSGKK
KVKDRNKRSIYLSAVRSHLFNQVVSERLRLHQLNTLDGDCVMLAGSKSYFVANPWDEALY
ARLAENDIQLSAPMWGRGQALSEAEALAFEQGVCGQYPEDLAGLEQAGLNQERRPLLLEP
QQLSYEIQEDTLVIKFALPAGSFATSVLRELVNYQDVKEREYQARKAAASEQAHD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaccccactacattatttgcatggcgagcctgaggcgagcgccgacctaagaaccttc
aatagcgattttatcgtgcaggagatcttgccatttcttccgacgggcgagggcgagcat
cacatgctgcacattcgcaaggaggggttaaataccgccgatgtggcgcgcatgctctca
agctttgccggcgtgcacccgaaagaggtgacctttgccggccagaaagacagacacgcc
atcactgagcagtggtttggggtgcgtattcccggtaagagcatgccagactggcagtcg
ctcaatagcgagcagcttaccgtgctatcaagcgcccgtcatggtaagaagctgcgcacc
ggcgccctggccggtaaccgctttatcctgactctaagggccgtgtctgacatggacgca
ctggtgcggcgcatcgagctgattaaagccacaggcgtgcctaactattttggcgagcag
cgtttcggccatgacggaaagaacctgattttcggtcgtcagatgctctcgggcaaaaag
aaggtgaaagacagaaataagcgtagcatctacctctcggcggtgcgctctcatctcttt
aatcaggtagtgagtgagcgacttcgtctacaccagctcaatacactcgatggtgactgt
gtgatgttggctggcagcaagagctacttcgtggccaatccctgggatgaagcgctttat
gctcgtctggcggaaaacgatattcaactctcggcgcccatgtggggtcggggccaggcg
ctgagtgaggccgaggcgttagccttcgagcagggcgtttgtggtcagtatcctgaagat
cttgccggccttgagcaggcggggctcaatcaggagcgccgcccgctgctcctcgagccg
cagcagctgagctatgagatccaggaagacaccttagtgataaagttcgccctgccggct
ggcagctttgccacctcagtgctgcgggaactggtgaattatcaagatgtcaaagagcgg
gaatatcaggccagaaaggccgcagcgagcgagcaagcccatgattaa
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