Shewanella halotolerans: K0H81_15090
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Entry
K0H81_15090 CDS
T09172
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
shao
Shewanella halotolerans
Pathway
shao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
K0H81_15090
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shao01002
]
K0H81_15090
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shao01011
]
K0H81_15090
Peptidases and inhibitors [BR:
shao01002
]
Cysteine peptidases
Family C82
K0H81_15090
Peptidoglycan biosynthesis and degradation proteins [BR:
shao01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
K0H81_15090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
QYJ89089
LinkDB
All DBs
Position
complement(3468581..3469522)
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AA seq
313 aa
AA seq
DB search
MMRKLLLLILSLAPLQLLANVYSLPANGGRLIGELQTHVVEKGDYFKTIADKYNIGILEL
METNPGVDPFLPTPGTQLVIPTQMLLPDVPRKGIVINLPELRLYYFPKNGREVHVFPVGI
GRIGRETPEMTTKIKARIPNPSWTPPASLRAEHLRERGEVLPPVVPAGPDNPLGKYAMQL
SYGDGSYLIHGTNKDFGIGMRVSAGCIRLNPDDIEWLFHQAKYGDSVRVINQTVKIATEP
DGRQIIEVHSPLSKTEDQPREKVISLSSKVVKFISQESVDNTKANDALLTQNGIPMVISH
PPLTAAQDLEITP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtaaattgctgttgctcatcttgagtctcgcaccactgcagttacttgctaat
gtctattccctgccggccaatggcggccgcctcatcggcgagctgcagacccatgtggtc
gagaagggcgactacttcaaaaccatcgccgataaatacaatatcggtatcttggagttg
atggaaaccaatcctggggtggatcctttcctgccgactccgggcacccagttggtgatc
cccactcaaatgttgctgccggacgtgccgcgcaagggcatagtgatcaacctgccggag
ctgcgtctctactattttcctaagaatggccgcgaggtgcatgtctttcctgtgggcatt
ggccgcatcggtcgtgaaaccccggagatgaccaccaagatcaaggcgcgtatccctaac
ccgagctggacgccgccggcgagtttgcgcgccgagcatctgcgtgagcgtggcgaggta
ttgccgcccgtggtgcccgctggcccggataaccccctgggtaaatacgccatgcagctc
tcctatggcgatggcagctacctgatccacggcaccaacaaggattttggtatcggcatg
cgcgtcagcgcaggttgtatcaggctaaacccagatgatatcgagtggttgtttcaccag
gctaaatatggcgacagcgtgcgggtgatcaatcaaacggtaaagattgctaccgagccc
gatggccgtcagatcatcgaggtgcattcgcccctgtctaagacggaagatcagccccgt
gagaaggtgatcagcctgagcagcaaggtggtgaaatttatcagccaggagagcgtcgat
aacaccaaggcaaacgatgccctgctgacccagaacggcatccctatggtgatctcacat
ccaccgttaacggcggctcaggatttagagatcactccctag
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