Shewanella halotolerans: K0H81_16025
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Entry
K0H81_16025 CDS
T09172
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shao
Shewanella halotolerans
Pathway
shao00630
Glyoxylate and dicarboxylate metabolism
shao00680
Methane metabolism
shao01100
Metabolic pathways
shao01120
Microbial metabolism in diverse environments
shao01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0H81_16025 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K0H81_16025 (fdhF)
Enzymes [BR:
shao01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K0H81_16025 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
Fer4_7
NAD_binding_8
DAO
Fer4
FAD_oxidored
Fer4_8
HI0933_like
Fer4_9
Fer4_21
NAD_binding_7
Fer4_6
Amino_oxidase
Fer4_Nqo3
Fer4_17
Fer4_10
GIDA
FAD_binding_2
Fer4_18
AlaDh_PNT_C
FAD_binding_3
Thi4
Lys_Orn_oxgnase
2-Hacid_dh_C
Fer4_16
Fer4_2
Fer4_15
Emfourin
Fer4_22
CxC7
Motif
Other DBs
NCBI-ProteinID:
QYJ89266
LinkDB
All DBs
Position
3678516..3682748
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AA seq
1410 aa
AA seq
DB search
MIELTFDGQVVKANRGEDLLTCAKAAGIAIPNLCHLGKQLDDKLAGKQDCNLCYVEVRDE
KGDFHTVKACKTQVEAPLEVITHSAALSKRRQAALKHLLSDHFADCEAPCQQACPAGVDV
QSYLLHIAQGNHKKAVKVIKQTLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLKRHAA
DLDLDSEDTYVPPKAPATGKRVAIIGSGPAGISAGYYLSNAGHEVTIFESMPKAGGWLRY
GIPEYRLPKQILDREIDLLCQNGLVIQTDTRLGRDIHLKELVNQFDAVCLAIGAQKAVPM
NYPGVDLEGCYLGVDYLKDHCTDNNYHTGQKVAVIGGGNTAIDCARTALRKGAEVTLFYR
RTRDEMPAEAYEIEEAEHEGVRFYFLTNPIENHGDANGRINAVTFEKMRLGEPDASGRRS
PQATGETFTEAFDTVIPAVSQTPDMTFLEHPESQLSTGEVALTRWNTFSGCEHTMSSGVE
KLFVLGDSRTGPATAVAAVADGRKAANAIEKLLSGELSCELTPAPFNSQKQDEQKPDSRH
FPARLLQAKAKMPELAINKRLDNFDEIELGFNDEEAMLEAARCLECGCQANTECALRDYA
TEYRVDGAALDKQGHRAFTQDASTPFINFDPNRCISCGACVAMCRQQSGHQAISFEPDSY
LALPQEMAASHTRQAPRAGFSATMADSQCVQCGNCIQVCPTGALTDARDKRQGVKHELKQ
TSTVCTYCGVGCRVIIHSDPLTGEIKRVSGDNRSQVNEGMLCVKGRFGFDFINSQQRLTQ
PLLRKDGELVQVSWNEAIDYIGTQLDRIKAEHGGDAIAGLASAKATNEDNYLFQKLFRSV
IGTNNIDHCARLCHASTVTALQESLGSGAMTNDIPSIKSSDLIFILGSDTEAAHPIIASK
IKQAVNQHGARLVVADPKRVSIADSAELYLRHRPGSDVMLLNAIMQEIIKQGWHDEDYID
RRVEGFDALRAEVMKDDYSLSNAAKITGVDADEIAHLARMIGTAEKTAIYYAMGITQHTS
GHDNVTAIANLQLLCGNIGVEGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTDPEVQA
AFRQAWQQEWLPEQIGLAATEMMHALAHGRLKALYVMGENPVLSDPDQAHVMQGLESAEL
LIVQDIFMTETAQLADVVLPAASFAEKPGHFTNTERRVQRLQAAINSPGLARRDWQIITD
IAKALGADWRYENEESIWQELIRVTPQYRGIGWQDTDPSTPQGLLGKHWPCPEPGHEGTR
LMHKERFTRGLGKMTPVGYRLPAELPCEDYPFTLSTGRLLEQFHTGTLTRKTDGLNTLGS
PRVMMSAIDADRLGVNNGDVLTLSTRRGSINIAAFVTRRAQPGVLFLPFHFAEAAANKLT
NNVLDPVAKIPEFKICAVRVEKANEAICWS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatagaactcaccttcgacggccaggtcgtcaaagccaaccggggcgaagatctgctc
acctgtgccaaggccgcaggcatagcgatccctaatttatgtcatctgggcaagcaactg
gacgacaaactcgcgggcaaacaagactgtaacctctgctatgtcgaggtacgcgacgaa
aagggcgactttcacacagtcaaggcctgtaagacacaggtcgaggcaccgctcgaggtg
atcacccattcggccgccctcagcaaacgccgccaagcggcgctgaaacaccttttgagc
gaccacttcgccgactgcgaagccccctgccaacaggcctgtccggccggcgtagacgtg
cagtcctatctgctgcatatcgcccagggcaaccacaagaaagcggtcaaggtgatcaaa
caaaccctaccgctgccgctctctatcggccgtgtctgcccggcgttttgcgaatcggcc
tgtcgccgcggcgagctggatgagcccctggccattcgccagctcaagcgtcacgccgcc
gatctggatctggacagtgaagacacctatgtgccgcccaaggcgcccgctaccggcaaa
cgcgtcgccatcataggcagcggcccggcggggatcagcgcgggttactacctctctaac
gcaggtcacgaggtaaccattttcgagtccatgcccaaggcgggcggctggctaagatac
ggtattcccgagtaccgtctgcccaagcagatcctggacagagagatagacctcctgtgt
caaaatggccttgtgatacagacagatactcgcctcggccgagacatccacctcaaggag
ctggtcaaccaattcgacgccgtctgtctcgccatcggcgcccagaaggcggtgcccatg
aactacccgggtgtagacctcgaaggttgctatttaggcgtggattaccttaaggatcac
tgcacagacaacaactaccacacgggccagaaggtggcggtgatcggcggcggcaacacc
gccatcgactgcgcccgcaccgcgctgcgcaagggcgccgaggtgaccctgttctatcgc
cgcacccgcgacgagatgccggctgaggcctatgaaatagaggaggccgaacatgagggt
gtgcgcttctatttcctcaccaaccccatcgaaaaccatggcgacgccaatggccgtatc
aatgccgtcaccttcgagaagatgcgcctgggcgagccagatgcctccggcagacgctca
ccccaggccacgggcgagaccttcaccgaggcgttcgatacggttatcccggcggtctcc
cagacaccggacatgaccttcctcgagcatccagagagccagctctccaccggcgaggtg
gccctgacccgctggaacaccttctccggctgtgaacatactatgtcatcaggggtggag
aagctgttcgtgcttggggattcgcgcaccggccccgccacggcagtcgccgcagtggcc
gatggtcgcaaggcggctaacgccatcgagaaactgctgagcggcgagctgagctgtgag
ctgacacccgcgcccttcaactcccagaagcaggatgagcagaagccagacagccgtcac
ttccctgcccgtctgctacaggccaaggccaaaatgccggaactcgccatcaacaagcgc
ctggataatttcgacgagattgaacttggctttaacgatgaggaggcgatgctcgaggcc
gcccgctgcctggagtgtggctgtcaggccaacactgagtgtgccctgcgggactacgcc
accgagtaccgtgtcgatggcgccgcgctcgataaacagggccaccgcgcctttacccaa
gatgccagcacaccttttatcaacttcgaccccaaccgctgcatcagctgcggtgcctgc
gtcgccatgtgccgccagcagtctggccatcaagcgatcagcttcgagcccgacagctat
ctagccctgccccaggagatggccgcctcgcacactcgccaggcgcctcgcgctgggttc
agcgccaccatggccgacagccaatgtgtgcagtgcggtaactgtatccaggtctgcccc
acaggggcactgaccgatgccagagacaagcgtcagggggttaaacatgagctgaaacag
acctccaccgtctgcacttactgcggcgtgggttgccgtgtcatcatccacagcgatccc
ttaacgggcgagatcaaacgggtatcgggcgacaaccgatcccaggtcaacgaggggatg
ctctgcgtcaagggccgcttcggattcgacttcatcaacagccagcaacgcctgacccag
ccgctgctgcgcaaagatggcgagctggtgcaggtcagctggaatgaggcgatcgactac
ataggcacccagctagatcgcatcaaggcagaacatggcggcgacgccatcgccggcctg
gcctcggccaaggcgaccaacgaagacaactatctgttccaaaagctgtttagaagcgtc
atcggcaccaacaacatagatcactgcgcccgcctgtgtcatgcctcgacggtcaccgcc
ctgcaagaaagccttggcagcggcgccatgaccaatgatattccgtcgataaaatcctcg
gatctcatcttcatcctgggctcggataccgaggccgcccaccccatcatcgcctccaag
atcaaacaggcggtgaaccaacacggtgcccgcctagtggtggccgaccccaaacgggtg
agcatcgccgacagcgccgagctctacctgcgtcaccgccccggcagcgacgtcatgctg
ctcaacgccatcatgcaggagatcatcaagcagggctggcacgacgaggactatatagac
cgacgcgtagaaggattcgacgcacttcgcgccgaggtgatgaaggacgactatagcctg
agtaacgccgccaagatcacaggcgtcgacgccgatgagatagcgcatctggcgcgcatg
ataggcacggcagagaagaccgccatctactacgccatggggatcacccagcacacctcg
ggacacgacaatgtcaccgccatcgctaacctgcaactgctgtgcggcaacataggcgtc
gagggcgcggggatcaacccgctgcggggccagagcaatgtccagggcgcctgtgacatg
ggcgccctgcccaactacttcaccggctaccagaaggtcaccgaccccgaggtgcaagcc
gccttcagacaagcctggcaacaggagtggctaccggaacagataggcctggcggctacc
gagatgatgcacgccctggcccacggcagactcaaggccctctatgtgatgggggaaaac
cctgtgctgagcgatcccgatcaggcccatgtgatgcaggggctggagtcggccgagctg
ctgatcgtccaggatatctttatgacggagacggcccagctggccgacgtggtgttgccg
gccgccagcttcgccgagaagccaggccacttcaccaataccgagcgccgggtgcagcgc
ctgcaggcggcgattaacagcccaggcctggcgcgccgcgactggcagatcatcacagat
atcgccaaggcactcggcgccgactggcgctatgagaatgaggaatcgatctggcaggag
ctgatccgcgtcacgccccagtaccgtggcatcggttggcaggacacagacccgagtacg
ccacaaggcctgctgggtaaacattggccctgcccagagcctggccatgagggcacccgc
ctgatgcataaagagcgctttacccgcgggctcggcaagatgacgcccgtcggctatcgc
ctgccggccgaactgccctgcgaagattaccccttcaccctctccaccgggcgcctgttg
gagcagttccacacaggcaccctgacccgcaagacggacggcctcaataccctggggtcg
cccagggtgatgatgtcggccatcgacgccgaccgtctgggggtgaacaacggcgacgtg
ctgactctgtcgacgagacgcggcagcatcaacatcgccgccttcgtcacgcgccgcgcc
cagccgggagtgcttttcctgcccttccactttgccgaggcggcggccaacaagctaacc
aacaatgtgctggaccctgtggccaagatccctgaatttaagatctgcgccgtcagggtc
gagaaggccaacgaggcgatctgctggtcttag
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