Shewanella halotolerans: K0H81_16670
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Entry
K0H81_16670 CDS
T09172
Symbol
ygfZ
Name
(GenBank) tRNA-modifying protein YgfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shao03016
]
K0H81_16670 (ygfZ)
Transfer RNA biogenesis [BR:
shao03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
K0H81_16670 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
QYJ89389
LinkDB
All DBs
Position
3849455..3850423
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AA seq
322 aa
AA seq
DB search
MTLTVSQPQWPLNEAQPAIVFSQLSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWG
AHCDPKGKMLASFRAFAHQDALLMMMPRETLALDLPQLQKYAVFSKAELVDASDDWCLIG
VSGEQAPAWIAQAFGEIAAELTEIPGGVILRDGDRFIIAVKRDTQTELLSKIDQPIYDFS
AWQAVEIAAGLPNIYARHQSQFVPQMCNVQAVDGISFTKGCYMGQETVARMKYRGGNKRA
LYIVQGSASVAIDDDSQLEMKLEDDEGYRRAGTIVEAVQRDGQLLLSAVLPNDTPLTAQL
RMAGDEASVLTLAPLPYSLDEE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttaccgtttctcaacctcagtggcccctcaatgaggcgcaacccgccatcgtt
ttcagccaactctcccatctcggccttatctctgtaaccggcgagcaggcacggactttc
atccacggtcaggtgaccacagatatcacctctcttgaggccgatcagtggcgctggggc
gcccactgcgatcctaagggcaagatgctggcaagcttcagagccttcgcccatcaagat
gccctgctgatgatgatgccaagagagacgctggcgctcgatctgccgcagctgcagaaa
tatgccgtgttcagcaaggcagaactggtggatgccagcgacgactggtgtctaataggc
gtcagcggcgagcaggccccagcctggatagcccaggcctttggcgagatcgcagccgag
ctcaccgagatcccaggcggcgtcatcctaagagacggcgatcgctttatcattgccgtt
aagcgcgatactcaaaccgagctgctgagtaagatagaccaacccatctatgacttcagc
gcctggcaggcggtcgagatcgccgccggtctgccaaacatatatgcccgtcatcagagc
cagtttgtgccgcagatgtgtaacgtgcaggcggtcgatggcatcagcttcaccaagggc
tgctacatgggtcaggaaaccgtggcccgcatgaagtatcgcggcggcaacaagcgcgcc
ctctatatcgtccaaggctcggccagtgtggcgatagatgacgacagccagctcgagatg
aaactggaagatgatgaaggttatcgccgcgccggcaccattgtggaagccgtgcagcgt
gacggtcagctgctactgagtgccgtactgcccaacgatacgccgttgacggctcagctg
agaatggcgggcgatgaggcatcagttctcaccctagcaccactgccctactccctagat
gaagagtaa
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