Shewanella halotolerans: K0H81_16680
Help
Entry
K0H81_16680 CDS
T09172
Name
(GenBank) PAS domain S-box protein
Organism
shao
Shewanella halotolerans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
PAS_9
PAS_3
MCP-like_PDC_1
HATPase_c
PAS
PAS_4
HisKA
PAS_8
dCache_1
Hpt
Diguanyl_cycl_sensor
PDE8A_N
PAS_7
HAMP_PhoQ
Motif
Other DBs
NCBI-ProteinID:
QYJ92022
LinkDB
All DBs
Position
complement(3851773..3857079)
Genome browser
AA seq
1768 aa
AA seq
DB search
MDMSRLRTFRSRIIVQIALPLIAIMAMVLSLIAWFNYRAEESYLYGDLEKQAEMVASRVH
HFLSFAEKDTRTFADLLGQMSRDQLLQQDGELKALLTRRLERHSDFYASAIAFRPSLTPN
QRPYAPYVFRDQDGVKFLDIGADSYDYTDGQWAWWSEAIDKPQGYWSLPYFDEGAGNILM
ITFSQSFGPSSPYWGVVTVDLALDALPAMAGIDADRMLVLDDKGRLIYHKDAQLLMSQGT
DKWLAPSNDNGDFISLLQSAKSGNSRMLAADGQAYLASVGVVPKLNWRVVIMTQEDKLSH
QLYMGLSSLVLTLLLISAVLYLTGYLTARRLSLPIERLAAGIVAFGAGKTKHIEGTRGAV
AEVETLTDKFNELAEVLAQREQALLDSRGNRFAKLIDGMSDKSFYCSLEPDGQIAQVSAG
VEKVLGVSPDLLKRKYQRMFSDNPINEANWEYMDSALQGNSVPPHQVEMIAANGSVRRLD
LFMQPLLADNGELLSIEMLFNDVTEQFSAAAWSNAVLESAPEAMLIVDEQGSVVFSNSRC
QQLFGFDAQQMLALNVDQLVPDSVKHHEALRAKFIAEGVDRRMGLGLGKTLKAKKADGSL
FPVEISLGLLPADSDGLRQVAASIRDMTEELATAKRIKDSESRFRGLVGNIPGAVYRTRL
GEQWVMEYVSDNIAEITGYPAADFIENKKRVFASLILEADREATDTAINKGIAEQQSFEV
QYRIHHRDGSLRWVHEKGKASYDDEGNALWFDGSIQDVTQSKLAQEKIAQSQQQLETITE
SIPNTVYQLRWIANDQRYFTFLSRACITTLGFHRDQLLANFDLVADCIIESERARIIRAL
SGESASGLKWIEEFRYQHPTGEQRWLQAGARGDRQDDGSIVWNGYLMDISERKQMDRELA
KREAHFRALFDNAGIGIVNVDDRGVILDCNEQFSQYLQLPIERLKGSIFFDYQDPDQGLE
AKNSFKRLMSDGADSVKLEIRLLNQAGEARWMDVNMTGLSDRQGEYRSAVLSMADISSLK
LLSEELTLAKDAADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTNLDKKQQNYVEK
IDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAADKQLELLFA
VAPNIPRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEILLKFSVRDNG
IGLTEEQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGSTFF
FSVRFKVADNQLIKVAQELEGMRILVADDNATARDILRSTLESMGFTVDTVRSGAEALSR
CQETDYGVALIDWRMPEMDGLETARRLLSERANPPKTLIVSAHADGDFIDKAEQAGISGY
ITKPISASRLLDGIMSALGKQGAMPVRRKGSEVSPALLAQLKGKRILLVEDNEMNQEVAS
EFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQATAELRKRPELADLPV
IAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLLYKTLLEYLGDDSQVIEESSTEQTDQHS
QDAYWPQHPALDIDKGLQLVQNSARLYRRIFERFYTGQSRCAELIATAQREGKQEEAVRY
AHTLKGVAGNLCCPELVTLAKQVEQALSDSIQADVTEALTQMGELLDSLCTTIGDWLSQT
GAETLPQEDGTEPGAATDAPAMSAQELDAAIKELLKMLEEADAEAVEKLQAVRDRLPTSL
ANKIAPVLNMVNAYQFDEAIELVEEIFS
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggacatgagcagacttcgtacctttcgtagccggataatcgtacagattgccttaccc
cttatcgccatcatggccatggtgttgagcctgatcgcctggtttaactaccgggccgaa
gagagctacctctatggcgatctcgagaagcaggccgagatggtggccagccgggtgcat
cattttctctccttcgccgagaaggatacccgcacctttgccgatctcttaggccagatg
agtcgcgatcagcttctccagcaagatggcgagctcaaggcgttgctgacccggcgcctg
gagcgccacagcgatttctatgccagcgccatcgcctttcgccccagcctgacgcctaat
caacggccctatgccccctatgtcttccgggatcaggacggcgtgaagttcctggatatc
ggcgcggacagctacgactataccgacggccaatgggcctggtggagcgaggcgatagac
aagcctcagggttactggtcgctgccctatttcgatgagggggccggtaacattttgatg
atcaccttctcccagtccttcggcccctcaagcccctactggggcgtggtgacggttgat
ctggccctggacgccctgccggccatggcggggatcgatgccgatcgcatgctggtgttg
gatgacaaggggcggcttatctaccacaaggatgcgcagctgctgatgtcccagggcacg
gataagtggctcgccccatcaaatgacaacggcgacttcatctccctgctccagtcggcc
aaatccggtaacagccgcatgttggccgccgacggtcaggcctatcttgccagcgtaggc
gtggtgcctaagctcaactggcgggtggtgatcatgacccaggaggacaagctctcccac
cagctctacatggggctctcctccctggtgctgaccctgctgctgatctccgctgtgctt
tatctgacgggttatctcaccgccagacgcctgtcactgcccatcgaacgtctggccgcc
ggcatagtggccttcggcgccggtaagaccaaacatatcgaaggcacccggggcgcggtg
gccgaggtggagaccctaacggataagtttaacgagctggccgaggtgctggcccagcgg
gagcaggcgctgctggattcacgcggcaaccgttttgccaagctgatcgatggcatgagt
gacaagtccttctactgctcgctggagcccgatggccagatcgcccaggtctctgccgga
gtcgagaaggtgctgggggtcagcccggatctgctcaagcgtaaatatcagcggatgttc
tccgacaaccctatcaatgaggcgaactgggagtacatggacagtgccctgcaaggcaat
agtgtgccgccccatcaggtggagatgatcgccgccaacggtagcgtgcgccgcctggat
ctcttcatgcagccgctgctggcggacaacggcgagctgctctccatcgagatgctgttt
aacgatgtgaccgaacagttctcggcggcggcctggtccaacgccgtgctggaatcggct
cccgaggctatgttgatcgttgacgagcagggtagtgtcgtcttcagcaacagtcgctgc
cagcagttgtttggctttgatgcccagcagatgctggcgctgaatgtcgaccagctggtg
cccgatagcgtcaagcatcatgaggccctaagagccaagtttatcgccgaaggggtggat
cgtcgcatgggccttgggctgggtaagacgctcaaggccaagaaggccgacggcagcctg
tttccggtggagatcagcctggggctactgcccgccgacagcgacggactgcgccaggtg
gcggcctcgatacgggacatgacagaagagctggccaccgccaagcggatcaaggacagc
gagagtcgcttccgcggtctggtgggcaatattccaggcgccgtctaccgtacccgatta
ggcgagcagtgggtgatggagtatgtcagcgacaacatcgccgagatcaccggctatccc
gccgccgactttatcgagaacaagaagcgggtctttgccagcctgatcctggaggcggac
agggaagccaccgacacggcgatcaacaaggggatcgccgagcagcagagcttcgaggtg
caatatcgtattcatcaccgggatggcagcctacgctgggtgcacgagaagggcaaggcc
agctatgacgatgagggcaatgccctctggttcgatggcagcatacaggatgtcacccag
agcaagctggcccaagagaagattgcccagtcccagcagcagctggagacgatcactgag
tcgatccccaacaccgtctatcagctgcgctggatagccaacgatcagcgctacttcacc
ttcctctcccgcgcctgcatcaccaccctgggcttccaccgggatcagctgctggccaac
ttcgacctggtggccgactgcatcatagagtcggagcgggcccgcatcattcgcgccctc
tccggcgagagcgcgtcggggcttaagtggatcgaagagtttcgctaccaacaccccacg
ggcgagcagcgctggctacaggcgggggccaggggcgaccgtcaggacgatggcagcata
gtctggaacggttacctgatggatatcagcgagcgcaagcagatggacagggaactggcc
aagcgcgaggcgcacttcagggccctgttcgataacgccggcatcggcatagtcaatgtc
gacgatcgcggcgtcatcttagattgcaacgagcagtttagccaatacctgcagctaccc
atagagcgtctcaagggcagtatattcttcgattatcaggatccggatcaggggctcgag
gccaagaacagctttaaacgcctgatgagcgacggcgccgacagcgtcaagttggagatc
cgtctgctcaatcaagctggcgaggccagatggatggacgtcaacatgacgggcctgtcc
gacaggcagggggaatatcgctccgccgtgctctccatggcggatatcagctccctcaag
ctgctctccgaggagctgaccctggccaaggatgcggccgatgccgccagcaaggccaag
agcgatttcctggcgaacatgtcccatgagatccgcactccgatgaacgccatcataggc
atgtcgcagctgtgtctacagaccaatttggataagaagcagcagaactatgtggagaag
atcgaccgcgcctccaagtcgctgctggggatcatcaacgacattttggacttctccaag
atagaggcgggcaagctggatatcgaggcggtgcctttccagctcgacactatgctggaa
gatctcagcgacatgttctcggtcaaggccgccgacaagcagctcgagctgctgtttgcc
gtggcgcccaatattccccgccatcttgtgggggatccgctgcgtctcagccaggtgttg
atcaatttgatgaacaacgccatcaagtttaccgagcagggcgaggtgatgctgtcgatc
agccagctggtgcgcgaggatgaggagatactgctcaagttcagcgtgcgcgacaacggc
ataggcctcaccgaggagcagcgcggcaagctgttccagtctttcagtcaggccgacagt
tccaccacccgcaagtatggcggcacaggccttgggctggcgatctgcaagcagctggtg
gaactcatgggcggcgagatcggcgtcgagagtcagttcggcaacggcagcaccttcttc
ttcagcgtgcgcttcaaggtcgccgacaatcagctgatcaaggtggcccaggagctggaa
ggaatgcggattctggtggctgacgacaacgccaccgcccgggatattctgcgcagcacc
ctggagagcatgggctttaccgtcgatacggtgcgcagcggcgccgaggcgctgagtcgc
tgtcaggagaccgactatggggtggcgttgatcgactggcgcatgcctgagatggacggc
ttggagacggcgcggcggttgctgagcgagcgcgctaacccgcccaagacgctgatcgtc
tcggcccatgccgacggtgattttatcgacaaggcggagcaggcggggatctcgggttat
atcactaagccgatcagcgcctcgcgcctgctggacggcatcatgtcggccctgggtaag
caaggtgccatgccggtgcggcgcaaaggcagcgaggtaagtcctgccctgttggcgcag
ctcaagggcaagcgcatcctgctggtggaagacaacgagatgaaccaggaggtggccagc
gagttcctcgagcaggtgggggtgatcctctcgattgccgagaatggtcaggtggcgctg
gagaagctggccatgcagagcttcgacttggtgctgatggattgtcagatgccggtaatg
gatggctatcaggccaccgccgagctgcgtaagcgtcccgagctggcagatttgcctgtg
atcgccatgacggccaacgccatggcgggcgacaaggagatgtgcctgcgcgccggcatg
aacgaccatatcgccaagcctatcgaggtgtcgctgctctacaagacgctgctggaatac
ctgggggatgacagccaggtgattgaggagagcagcactgagcagactgatcagcacagc
caggatgcctattggccccaacacccggcgctggacatcgataaggggctgcagctggtg
cagaactcggcgcgtctctaccggcggatattcgagcgtttctatacgggtcagtcccgc
tgcgcggagcttatcgccaccgcacagcgtgagggcaagcaggaggaggcggtgcgttac
gcccacaccctcaagggggtggccggtaacctctgctgcccagagctggtgaccttggcc
aagcaggtagagcaggcactcagcgattcgatccaggccgatgtgactgaggcgctgact
cagatgggtgagctgttagacagcctgtgcaccactataggcgactggctcagtcagacc
ggggccgagacgctgccgcaagaagatggcaccgagcccggggcggctaccgatgcgcca
gccatgtcggcccaggagctggatgccgccatcaaggagctgctcaagatgctggaggag
gcggacgccgaggcggtggagaagctacaggcggttcgcgatcgtttgccaacctcgctc
gctaacaagatagcgcccgtgctcaacatggtgaacgcctatcagtttgacgaggcgatc
gagctggtggaggagatctttagctag
DBGET
integrated database retrieval system
