Shewanella halotolerans: K0H81_17620
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Entry
K0H81_17620 CDS
T09172
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shao
Shewanella halotolerans
Pathway
shao03420
Nucleotide excision repair
shao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0H81_17620 (uvrD)
03430 Mismatch repair
K0H81_17620 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_17620 (uvrD)
Enzymes [BR:
shao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0H81_17620 (uvrD)
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0H81_17620 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K0H81_17620 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYJ89565
LinkDB
All DBs
Position
complement(4069226..4071406)
Genome browser
AA seq
726 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVSGSNMGRMWIGTFHGLAHRLLRTHYQDANLPQSFQILDSDDQL
RLIKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPIEQNLLKIYQVYQES
CDRAGLVDFAEILLRAHELWLNKPHILEHYQERFKNILVDEFQDTNAIQYAWIRVLAGST
ANVMIVGDDDQSIYGWRGAQVENLHRFLQDFPAAQTIRLEQNYRSSGNILNASNELIANN
PDRLGKKLWTEDKDGEKIGLYCAFNEMDEARFIVGRITDWQDMGGNLSDCAILYRSNAQS
RVLEEALLHKGMAYRIYGGLRFFERQEIKDAMGYLRLISNKNDDAAFERIINTPTRGIGD
RTLEILRSTARQQELTLWQTCLRLLDEKVLSGRAANAVRGFMDLIVTLQQETAEQSLHRM
TDHVIQASGLKTMYEAEKGEKARARVENLEELVTAARTFVMPEDLEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFPMVFMAGVEEGIFPSQMAMDEGDRLDEERRLCY
VGMTRAMKQLYITYAESRRIYGRENYARPSRFIKEIPGDYVQEIRMRTSVSAPASSNRFG
QAQPAFNGSAFNDSGFNIGQRVNHPKFGEGKVTNFEGSGAQARVQVDFLDVGSKWLVVAY
ARLETL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactcgacggcttaaacgacaaacagcgcgaggccgtcggcgca
ccacaatctagcatgctggtgttggcgggcgcgggcagtggtaagacccgggtactgacc
caccgcattgcctggctgatgcaggtagagcagcagagtccctattctattctggcggtg
acctttaccaacaaggccgcggccgagatgcgtgagcgtgtggagaaggtgagcggtagc
aacatgggccgcatgtggatcggtaccttccatggcctggcacatcgcctgctgcgcact
cactatcaagacgccaacttgccccagagtttccagatcctcgactcagacgaccagctc
aggctgatcaagcggatccttaagagcctcaacctggacgagaagcagtatccgccccgt
caggcccagggctatatcaatggcaagaaagatcaggggctgaggcctaagcatatcgat
gccggtggcttccccattgagcagaacctgttgaagatctatcaggtgtatcaggagtca
tgtgatcgcgccggcctggtggattttgccgagatcttgctaagggcccacgagctatgg
ctcaacaagccccatattctggagcactatcaggagcgctttaagaacatcctggtggat
gagtttcaggacaccaacgccatccagtatgcctggatccgcgtgctggccggcagcacg
gccaacgtgatgatcgtcggcgacgacgaccagtctatctatggctggcgcggcgcccag
gtggagaacttgcaccgcttcctgcaggacttcccggcggcccagaccatacgcctggag
cagaactatcgctccagcggcaacattcttaacgcctccaacgagctgatcgccaataac
ccggatcgactgggcaagaagctgtggaccgaggacaaggacggcgagaagatcggcctc
tattgcgccttcaatgagatggatgaggcccgctttatcgtgggtcgcatcacagactgg
caggatatgggcggtaacctcagtgactgtgccatcttgtatcgctccaacgcccagtcg
cgggtgttggaagaggccttgctgcacaagggaatggcctatcgcatctatggcggcctg
cgcttcttcgagcgtcaggagatcaaggatgccatggggtatctgcgcctgatcagtaat
aaaaatgacgatgccgccttcgagcgtatcatcaacacgccgacccgtggcataggcgac
cgtaccctggagatcctgcgtagcacggcgcgccagcaggagctgacactgtggcagacc
tgtctgcgcctgctcgatgagaaggtgctctctggccgcgcagcaaacgcggtacgtggc
ttcatggatcttatcgtcaccttgcagcaggagacggcggagcagtcgctgcaccgcatg
accgaccacgtaattcaggcctccggcctcaagaccatgtatgaggcggagaagggcgag
aaggcccgcgccagggtggaaaacttagaggagctggtcaccgcggcgcgcaccttcgtg
atgccggaagatctcgaagacatgggcgagctaaacgcctttctgtctcatgcggcgctc
gaggcgggcgagggccaggccgatgccttcaccgatgcggtgcagctgatgacgctgcac
tcggccaaggggcttgagttccccatggtgttcatggcgggcgtcgaggaggggatcttc
cccagtcagatggcgatggatgagggcgacaggttggatgaggagcgccgtctctgctac
gtgggtatgacccgcgccatgaagcagctctatatcacctatgccgagtcgcgccgtatc
tatggccgggaaaactatgcccgtccgtcacgtttcatcaaggagatccctggcgactat
gtgcaggagatccgcatgcgaaccagcgtgtcggcgccggcgagcagcaacagattcggt
caggcccagcccgcctttaacggttcagccttcaacgattccggcttcaatatcggccag
cgggtgaatcatcccaagtttggcgaaggcaaggtgactaacttcgagggcagcggcgcc
caggccagagtccaggtggattttctcgacgtgggcagcaagtggctggtggtcgcctat
gcccgtctcgagaccttgtag
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