Shewanella halotolerans: K0H81_18955
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Entry
K0H81_18955 CDS
T09172
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shao03021
]
K0H81_18955 (rpoH)
Transcription machinery [BR:
shao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0H81_18955 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
2Fe-2S_thioredx
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
QYJ89813
LinkDB
All DBs
Position
complement(4379366..4380223)
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AA seq
285 aa
AA seq
DB search
MTNQTQSMALMVPQSSSSIEAYIHSAHNIPMLEANEEYELAKRLQETGDIQAAKQLIMSH
LRFVIHVAKGYAGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKAKKRLGWFSDEEVTMVAENLGVSKSDVTEMESRMAA
QDPAFDLASDNDDDQDYAPVHYLEDHSSDIASQVENDNFEADNQTRLLAAIKTLDERSQH
ILQARWLDEDKTTLQELAATYQVSAERIRQLEKNAMNKLKGRMEM
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaaacgcaatcaatggcactaatggtacctcaaagcagcagtagcatagag
gcttatatccattctgcgcacaacattcctatgttggaggcgaatgaggagtatgagctg
gcgaaacgtctgcaggagaccggtgacattcaggctgcgaagcagttgattatgtctcat
cttcgtttcgttattcatgtcgccaaaggttacgcgggttatggtctgccacaggcggat
ctgatccaggaaggtaacattggtctgatgaaggcggtaaagcgctttgatcccgatgtg
ggtgtacgtcttgtctcgtttgccgtgcattggattaaagccgagatccacgaatacgtg
ctaaaaaactggcgtatcgttaaggtcgcgaccaccaaggcgcagcgtaaactgttcttc
aatctgcgtaaggctaagaaacgtcttggctggttcagcgatgaagaggtgaccatggtg
gccgaaaacctgggcgtctcgaagagcgatgtgactgagatggaatcacgcatggcggcg
caggatccagccttcgatctggccagtgacaacgatgacgatcaggactatgccccggtg
cattaccttgaggatcattcgtctgatatcgcctctcaggtcgaaaatgacaacttcgaa
gccgataaccaaactcgtcttctggcggccatcaagacccttgatgagcgtagccagcat
attctacaggcgcgttggttagacgaagataagaccacgctgcaagagctggcggccact
tatcaagtttctgccgagcgtatcaggcagcttgagaagaacgccatgaacaagctcaag
ggtcgcatggaaatgtaa
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