Shewanella halotolerans: K0H81_19410
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Entry
K0H81_19410 CDS
T09172
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
shao
Shewanella halotolerans
Pathway
shao00541
Biosynthesis of various nucleotide sugars
shao01100
Metabolic pathways
shao01250
Biosynthesis of nucleotide sugars
Module
shao_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
K0H81_19410 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shao01005
]
K0H81_19410 (rfaD)
Enzymes [BR:
shao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
K0H81_19410 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
shao01005
]
Core region
K0H81_19410 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QYJ89898
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Position
4487306..4488259
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AA seq
317 aa
AA seq
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MIIVTGAAGFIGSNLVKALNNLGRSDIIAVDDLTDGTKMFNLADCEIADYLDKADFIEQI
AQGQFDGKVEVIFHQGACSSTTEWDGRFMMANNYEYSKTLLHFCERNGSQFIYASSASVY
GGSDKFIEQRELEKPLNVYAYSKFLFDQYVRQHSFTTQVAGLRYFNVYGPREQHKGGMAS
VAFHFNNQIKASGICRLFQGHDGFEDGKQLRDFVYVEDVVKVNLWLWQNPGISGVYNCGT
GQAQSFNDVANAVIAYHGKGEIEYIPFPDKLKGAYQSYTQADLTQLRAAGYTQAFKTVEQ
GVPEYLDWLAAQHFIGQ
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagtaacgggtgctgccggctttatcggtagcaacttagttaaagcgctcaat
aatttagggcgtagtgacattatcgccgtagacgacctgaccgacggcactaagatgttt
aacctggccgactgtgaaattgccgactatctggataaagccgacttcatcgagcagatc
gcccagggacagttcgatggcaaggtcgaagtgatcttccatcagggtgcctgctcgtcg
accacagagtgggacggcaggtttatgatggccaacaactacgagtattccaagacactg
ctccacttctgcgagcgtaacggcagccagtttatctacgcctcgtcggcctccgtctat
ggcggcagcgacaagtttatcgagcagcgagagctggagaaaccactcaacgtctacgcc
tactctaagttcctgttcgaccaatatgtcaggcagcacagcttcaccactcaggtagct
ggcctacgttacttcaacgtctatgggcctagggagcaacacaagggcggcatggccagc
gtggccttccacttcaacaaccagatcaaggcaagcggcatctgtcgcctgttccagggc
cacgacggcttcgaagatggcaagcagctgagagacttcgtttatgtggaagatgtggtc
aaagtcaacctctggctttggcaaaacccagggatctcaggggtatacaactgtggtacg
ggtcaggcacagagcttcaacgacgtggccaatgcggtgatcgcctatcatggtaaggga
gaaattgaatatattcccttcccggataagctcaagggcgcctatcagagctatacccag
gccgacctcacgcagctgagagccgccggatatactcaggcctttaagacggtcgagcaa
ggggttcccgaatatctggactggctggccgcgcagcactttatcggtcagtag
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