Shewanella halotolerans: K0H81_19510
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Entry
K0H81_19510 CDS
T09172
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shao
Shewanella halotolerans
Pathway
shao03030
DNA replication
shao03410
Base excision repair
shao03420
Nucleotide excision repair
shao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H81_19510 (polA)
03410 Base excision repair
K0H81_19510 (polA)
03420 Nucleotide excision repair
K0H81_19510 (polA)
03440 Homologous recombination
K0H81_19510 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shao03032
]
K0H81_19510 (polA)
03400 DNA repair and recombination proteins [BR:
shao03400
]
K0H81_19510 (polA)
Enzymes [BR:
shao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0H81_19510 (polA)
DNA replication proteins [BR:
shao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K0H81_19510 (polA)
DNA repair and recombination proteins [BR:
shao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K0H81_19510 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0H81_19510 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QYJ89917
LinkDB
All DBs
Position
4507333..4510083
Genome browser
AA seq
916 aa
AA seq
DB search
MPNIAENPLILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPTQMAV
VFDAKGKTFRNEMYAEYKAHRPPMPDDLRTQIEPLHRIIRALGLPLVCIPGVEADDVIGT
IARQASQEGRSVLISTGDKDMAQLVDDKITLINTMTNTILGPQEVSEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTALAMLQGVGGVEAILANPEKMPELGFRGAKTMPAKIAEHG
DMLKLSYELATIKCDVKLEQDWHQLNIQDADRDELIKCYGEMEFKRWLAEVLDNKSSTDS
QEEADEVPAPQTIDTQYDTILTWEALDEWLKALAAAPLFALDTETTSLNYMEAKLVGLSF
AIEPGKAAYLPLAHDYADAPEQLDSEQVLAKLKPLLEDPSLLKVGQNLKYDMSILANVGI
SLKGVAFDTMLESYVFNSVASKHNMDDLALKYLGHKNISFEEIAGKGVKQLTFNQIPLET
AAPYAAEDADITLRLHQHLWPRLQKASELASVFTDIELPLVNILSQIERQGVLIDSMLLG
QQSDELARKIDELEQKAYEIAEEPFNLGSTKQLQALFFEKLGYPVLKKTPKGAPSTAEEV
LVELALDYPLPKIILEHRSLSKLKSTYTDKLPLMVDGKTGRVHTSYHQAIAATGRLSSSE
PNLQNIPIRTEEGRRIRHAFVAPEGRKILAADYSQIELRIMAHLSQDKGLLSAFAEGKDI
HRATAAEVFDVDFGEVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQQYIDIYFK
RYPGVLKYMEDTRAAAAEQGYVSTLYGRRLYLPAIKDRNAMRRQAAERAAINAPMQGTAA
DIIKKAMINIAQWIETETQGEITMIMQVHDELVFEVDANKADSLKLKVCELMAQAASLDV
ELLAEAGIGDNWEQAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatatcgctgaaaacccactcattcttgtggatggttcttcctacctttaccgc
gcctactatgcgccgcctcacctgaccaactccaagggtgaagccacgggggctgtgtat
ggcgtgatcaacatgctgcgcagcctgcttaaccaatataagccgacccagatggcggtg
gtgttcgatgccaagggaaaaaccttccgcaatgagatgtatgccgaatataaggcccac
agaccccccatgccggacgatctcagaacgcagatcgagccgctgcatcgcatcattcgc
gcattggggcttcccctggtctgtattcccggcgtcgaggccgatgatgtcataggcacc
atcgccagacaggcgagccaggaaggccgctccgtgctgatcagtacgggcgataaagat
atggcccagttggtggatgacaagatcaccctgatcaacactatgaccaacactatccta
ggccctcaagaggtgagcgagaagtttggtgtcggccctgagctgatcatcgacctactg
gcactgcaaggcgataaggcagataacatccccggcctgcctggcgtgggtgagaagacg
gcgctggctatgctacaaggcgtcggcggcgtcgaagccatcctagccaacccagagaag
atgccggaactcggctttaggggtgctaagaccatgcccgccaagatcgccgaacatggc
gacatgctcaagctctcctatgagctggcgaccatcaagtgcgacgtcaagctggagcaa
gactggcaccaactcaacattcaagacgcggatcgcgacgaactgatcaaatgctacggc
gagatggaatttaagcgctggctggccgaggtgttagacaacaagtcgagcaccgacagc
caagaagaggccgacgaagtgccggcgcctcaaactatcgatacccagtacgacaccatt
ctgacttgggaagccttagatgagtggctaaaggccctggccgccgcaccactatttgcc
ctggataccgaaaccaccagcctcaactacatggaagccaaactggtggggctctcgttt
gccatcgagccaggcaaggccgcctatctgccgctggcacacgattatgccgatgcccca
gagcagctcgacagcgagcaggtactagccaagctcaagccactgctggaagaccctagc
cttctcaaggtgggacagaaccttaaatatgacatgagcatactggccaatgtcggtatc
tccctcaagggcgtggccttcgataccatgctagagtcctatgtgtttaactcggtcgcc
tccaagcacaacatggatgacctggcgctgaaatacctgggtcataagaatatcagcttc
gaagagatcgcgggcaagggcgttaagcagctgaccttcaaccagatcccgctggagacg
gcagcaccttacgccgccgaagacgccgatatcacactcaggttgcatcaacacctctgg
ccaagactgcaaaaggccagcgagcttgccagcgtctttaccgacatagaactgcctctg
gtcaacatattgtctcaaatcgaacgtcagggcgtgttgatcgacagcatgttgctgggc
cagcagagcgacgaattggcacgcaagatagatgagctggaacagaaggcttacgagatc
gctgaagagccctttaacctgggctcgaccaaacagctgcaggccctcttcttcgagaag
ctgggctatccggtattgaagaaaactcctaagggcgcaccgtccaccgctgaagaggta
ctggtcgagctagcactagactatccgctgcccaagatcatcctggagcacaggagtcta
tctaagcttaagagcacctataccgacaagttgccactgatggtcgatggcaagactggc
cgggtacacaccagctaccatcaggccatcgctgccaccggtcgcctgtcatccagcgaa
cctaacctgcagaacatccccatccgcaccgaggagggccgccgtattcgtcacgccttc
gtggcgccagagggacgcaagatcctcgcagccgactattcgcaaatcgagctgaggatc
atggcccacctctcccaggataaaggcctgctgagtgccttcgcagagggcaaggatatt
cacagagctaccgctgccgaggtgtttgacgtcgacttcggcgaagtcaccagcgaacag
cgtcgccgcgccaaggcggtgaactttggtctcatctatggcatgtcggccttcggtctg
gcccgccagctggatattccgcgtcacgaggcccagcaatatatcgacatctacttcaag
cgctatcctggcgtgctcaagtatatggaagatacccgcgctgccgccgccgagcaggga
tacgtatcgaccctctatggtcgcaggctctatctaccagccatcaaggatagaaatgcc
atgcgccgtcaggcagcggagcgcgccgcgatcaacgcccccatgcagggcacggccgcc
gatatcatcaagaaggccatgatcaatatcgcccagtggatcgagacagagacccaggga
gagatcaccatgatcatgcaggtgcacgatgaactggtgtttgaggtcgacgccaacaag
gccgattcgctcaaactcaaggtgtgtgaactgatggcacaggccgcctcgttagatgtc
gagctactggccgaggctggtatcggcgataactgggaacaggcgcactag
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