Shewanella halotolerans: K0H81_19620
Help
Entry
K0H81_19620 CDS
T09172
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
shao
Shewanella halotolerans
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shao01002
]
K0H81_19620
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
shao02042
]
K0H81_19620
Enzymes [BR:
shao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
K0H81_19620
Peptidases and inhibitors [BR:
shao01002
]
Metallo peptidases
Family M9
K0H81_19620
Bacterial toxins [BR:
shao02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
K0H81_19620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
DUF7180
Cathelicidins
Motif
Other DBs
NCBI-ProteinID:
QYJ89933
LinkDB
All DBs
Position
4533868..4535679
Genome browser
AA seq
603 aa
AA seq
DB search
MLRQSLCALLLVGPSLLVGCSVTAPGQIAQEKITPRQIDSAFINELSTLPSQQLFSHDNP
LLDTAGLAKALQAIMQSQDEASLDALLYYLRAFSYFGPMDKLTDTEYTALTDALSRLGNS
QLITQAPRLQEHFAVTLYRYYGSDDKVNNQRAEQLASLLPLLNRQLQHVAKQAPSQAADY
ALWETLRAYGMLLNVARKQPDGALNKQLIAAELDKPLLDFAASKLSLHDQQDWPRANAYW
ALGLYRLALPSGEEGKLTPAEQALDDAMVRLAELDVAQRGEAAKTTYTLGYHVNAFAGLE
ACKTRSSVCQIPELTQVLPIRHQCSDSLYILAQDLTPDELNTSCTKLTSQEANFHRLLET
QHQPTANDNNDALQVVAFKNWSQYNAYGQLLFDIGTDNGGMYIEGTPSNPDNQASFFAYR
QFWIAPEFAIWNLNHEYVHYLDGRFVKYGGFGHFPRKLVWWSEGLAEYVSKGNDNPSTLK
VIKAKLDEAPDLKTIFATEYKDGLDRTYKWSYMAIRFLAEHHPEELVRLSHYLKTDYFEG
YEKLLDELSAQQEAFSAWLTKQVAQFEEYDTDKAPKINKLNRYAYRDYLMPSHLKLDGAH
QHF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgccaatcactctgcgccctcttgctcgtcggccccagcctcttggtgggctgc
agcgtcactgcaccaggacagatagcccaagaaaagataacccctagacagatagactcg
gcctttatcaatgagctaagcaccttaccgtcacagcagctcttcagccatgacaacccc
ctgctcgataccgccggcttggctaaggcactacaagccatcatgcagagccaggatgag
gcaagcctagacgccctgctctattacctaagggcctttagctatttcggccccatggat
aagctgaccgataccgaatacaccgctctgacagatgccttaagccgacttggcaatagt
cagttgatcactcaggcgcccagattacaggagcacttcgcggtaaccctgtatcgttac
tatggcagtgatgacaaagtaaataaccagcgcgccgagcagcttgctagcttgctcccc
ctacttaatcggcaactacaacatgttgcaaaacaagcgcctagtcaggcagcagattat
gctctttgggagacactgagagcctatggcatgctgctgaatgtcgcgcgcaaacagccc
gatggcgcgctcaataagcagttgatcgccgccgaactggataagcctctgctcgacttt
gcggcctctaaactaagcctgcatgatcagcaagactggccaagagccaatgcctattgg
gcactggggctctaccgcctagcactccccagcggcgaagagggcaaacttaccccagca
gaacaggcactggacgatgccatggtaagactcgccgagctggatgtcgcccagcgtggc
gaggccgccaagaccacctataccttgggctatcatgtgaacgccttcgccggcctggag
gcctgcaaaacccgcagcagtgtctgtcagatccccgagctgacacaagtcttacccata
cgccatcaatgttcagatagcctgtatatcctggcgcaagatctcaccccagatgagctg
aataccagctgcactaagctcacctcacaggaggccaactttcatcgactactcgagact
cagcaccagccgaccgccaacgataacaatgacgcgctgcaggtagtggccttcaagaat
tggagccaatacaacgcctacggccaactgctgttcgacataggcacggataacggcggc
atgtatatcgaaggcacgccgtcgaatcccgataatcaggccagcttcttcgcctatcga
cagttttggatcgcgcccgagtttgccatctggaacctgaatcacgaatatgtgcattat
ctcgacggccgcttcgtgaaatatggcggcttcggccattttccgcgcaagctggtgtgg
tggtcggaagggcttgccgagtacgtctccaagggcaatgacaatccatcgaccctaaag
gtcatcaaggctaaactcgatgaggcgccagatctcaagaccatcttcgccaccgaatat
aaggatggcctggatagaacctataagtggagttacatggccatccgcttcttggcagag
caccacccagaggagttggtgcgtctcagccattacctgaagacagattattttgaggga
tatgagaagctgctcgatgaactctcagcgcaacaagaagcattctcggcatggttaacc
aaacaggttgcccaatttgaggagtatgacacggataaggcgcccaagataaacaagctt
aatcgttacgcctatcgcgattatctgatgccgagccatctcaagttagatggggcccat
caacatttttaa
DBGET
integrated database retrieval system
