Shewanella halotolerans: K0H81_19835
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Entry
K0H81_19835 CDS
T09172
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shao
Shewanella halotolerans
Pathway
shao00061
Fatty acid biosynthesis
shao00071
Fatty acid degradation
shao01100
Metabolic pathways
shao01212
Fatty acid metabolism
shao02024
Quorum sensing
shao04146
Peroxisome
Module
shao_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shao00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K0H81_19835
00071 Fatty acid degradation
K0H81_19835
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K0H81_19835
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0H81_19835
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shao01004
]
K0H81_19835
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shao04147
]
K0H81_19835
Enzymes [BR:
shao01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K0H81_19835
Lipid biosynthesis proteins [BR:
shao01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K0H81_19835
Exosome [BR:
shao04147
]
Exosomal proteins
Exosomal proteins of breast milk
K0H81_19835
Exosomal proteins of breast cancer cells
K0H81_19835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QYJ89976
LinkDB
All DBs
Position
complement(4582294..4584090)
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AA seq
598 aa
AA seq
DB search
MSLQQYHPISLMQAQSQQRGDAIALEGYGLSAPWQQISWRQFDEIGDQIAKALIASGFAA
QDKVAILSQNCPQWTCADVGALKAKAVVVPIYPTSTLEQARYIIDDAQAKLIFVGDAEQY
HMARELLALCPSLTQIVVFDAEVALAQEDTAVHFDSLLTQTHSPEVETELAHRLANLALD
DLLTLIYTSGTTGDPKGVMLDYRNIASVVRQHDTILPFTPGDVSLAFLPLSHVFERGWSF
YVLCRGGHNVYLKDPMTVKEAIVDIRPHTLCVVPRFLEKVYSAVQDKVNKAPDTRKKLFA
WAMSVGERQFEVSQGRAKASWWLKIQWKLAHKLVYSKLQQVLGGRLKFMPCGGAALDQNV
ASFFHGIDIPVLCGYGMTETTATVTCNTLDNRVAGSNGKTLPEVEIKLGKDNEILVRGDT
VMRGYYNRPQETADSFEDGWLKTGDAGQLDEQGNLFITDRIKELMKTSNGKYIAPQRVEG
KVGCCPFIEQVAVIADAKNYVTALIVPAFESLEAWAEEKGLHYESPMELLRHSHVIEHFE
QRLKHLQQELAGFEKIKKFTLLPEAFSMEAGLLTPTMKLRRKMIYHKYATEINAMYSK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctccaacagtatcatcccatcagcctgatgcaggcccagagccagcaacgtggc
gatgccatcgcattggaaggctatggcttatcggcgccttggcagcagatcagttggcga
caattcgacgagattggtgaccagatcgctaaagcgctgatcgcttctggcttcgcggcc
caagacaaggtggcgatcctgtcgcaaaactgcccccaatggacctgtgccgacgtcggt
gccctcaaggccaaggctgtggtggtgcccatctatcccaccagtaccctggagcaggcg
cgctacatcatagacgatgcccaggccaagctgatcttcgtcggcgatgccgagcagtac
cacatggcccgcgaactgcttgcactctgccccagcctgacccagatagtggtcttcgat
gccgaggtggcgctggcgcaagaggatacagctgttcatttcgatagcctgctgacgcaa
acccattcgcctgaggtcgagaccgaactggctcaccgtctggctaacctggccctggac
gatctgctgaccctgatctacacctcgggcaccacgggtgaccctaaaggggtgatgctg
gattatcgtaatatcgcctctgtggtccgtcagcacgatactatattacccttcacgcct
ggcgatgtgtcgctggccttcctgccgctgagccatgtgttcgaacggggctggagtttc
tatgtgttgtgccgcggcggccataacgtctacctcaaagatcctatgacggtgaaagag
gcgatcgtcgatattcgtcctcataccctttgtgtggtgccgcgctttctggagaaggtc
tacagcgcggtgcaggataaggtcaataaggcgcccgatacccgcaagaagctgtttgct
tgggctatgtctgtgggcgagcgtcagttcgaggtcagtcaggggcgtgctaaggcttcc
tggtggctcaagatccagtggaaactggcccataagctggtgtacagcaagctgcagcag
gtgctgggtggcaggcttaagtttatgccttgcggcggcgcggcgctggatcagaacgtg
gccagcttcttccatggcatagatattcccgtgctctgtggctacggcatgacggagacc
acggcgaccgtgacctgtaataccctggataaccgtgtcgccggctctaacggcaagacg
ctgccggaagtcgagatcaagctgggtaaagacaacgagatcctggtgcgcggcgatacc
gtgatgcgcggctactacaaccgccctcaagagaccgccgacagcttcgaagatggctgg
ttgaaaacgggcgacgccggtcaattagacgagcagggcaacctgtttatcacagacaga
atcaaagagttgatgaagacatcaaacggcaaatacattgcgccgcagcgggtcgagggt
aaggtaggttgctgccccttcatcgagcaggtggcggtgattgccgatgcgaaaaactat
gtgaccgcgcttatcgtaccggcgttcgagtcgttagaggcttgggccgaggagaagggg
ctgcattacgagtcgcccatggaactactgcgccacagccatgtgatcgagcacttcgag
cagcgcctcaagcatctgcagcaggagctggcaggcttcgagaagatcaagaagtttacc
ctgctgcccgaggcattttccatggaggctggcctgctgacgccgaccatgaagctaagg
cgtaagatgatctaccataagtacgccacagaaattaatgctatgtattcgaaatag
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