Streptomyces harbinensis: HUT13_00240
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Entry
HUT13_00240 CDS
T07389
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUT13_00240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_00240
Enzymes [BR:
shar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HUT13_00240
DNA repair and recombination proteins [BR:
shar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUT13_00240
Prokaryotic type
HUT13_00240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QKV67372
LinkDB
All DBs
Position
46916..47593
Genome browser
AA seq
225 aa
AA seq
DB search
MAARPLNEIVEAGWAKALEPVADRIAAMGDFLRAEIAQGRTYLPAGQHVLRAFSQPFDGV
RVLIVGQDPYPTPGHAVGLSFAVAPEVRPLPGSLENIFRELHTDLGAPRPSNGDLTPWTR
QGVLLLNRALTTAPRSPGAHRGKGWEEVTEQAIRALAARGKPLVAILWGRDARNLRPLLG
PVPSVESAHPSPMSADRGFFNSRPFSRANALLAEQGAQPVDWTLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgaccgttgaatgagattgtggaagccggctgggccaaggccctggaaccg
gtggccgaccggatcgcggcgatgggcgatttcctgcgcgcggagatcgcccagggccgc
acctacctccccgcgggacagcacgtcctgcgggccttcagccagcccttcgacggcgta
cgggtgctgatcgtcggccaggacccgtaccccaccccggggcacgccgtggggctgagc
ttcgcggtggcgcccgaggtgcgtccgctgccgggcagcctggagaacatcttccgcgag
ctgcacaccgacctcggcgcgccccggccctccaacggcgacctcaccccctggacgcgg
cagggggtgctgctgctgaaccgggcgctgaccaccgcgccgcgcagccccggtgcccac
cgcggcaagggctgggaggaggtcaccgaacaggcgatccgggcgctggcggcgcgcggg
aagccgctggtggcgatcctgtggggccgcgacgcccgcaatctgcgcccgctgctgggc
ccggtgcccagcgtggagtcggcgcacccctcccccatgtcggccgaccgggggttcttc
aactcccggccgttcagccgggccaacgccctgctggccgagcagggcgcgcagccggtg
gactggacgctgccgtga
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