Streptomyces harbinensis: HUT13_02580
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Entry
HUT13_02580 CDS
T07389
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
shar
Streptomyces harbinensis
Pathway
shar00750
Vitamin B6 metabolism
shar01100
Metabolic pathways
shar01240
Biosynthesis of cofactors
Module
shar_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
HUT13_02580 (pdxS)
Enzymes [BR:
shar01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
HUT13_02580 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
TetR_C_27
IGPS
NMO
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
QKV67784
LinkDB
All DBs
Position
complement(650829..651743)
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AA seq
304 aa
AA seq
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MSSTSPSTPQTPETGTARVKRGMAEQLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPA
DIRKDGGVARMSDPDMIDGIIEAVSIPVMAKSRIGHLVEAQVLQALGVDYIDESEVLTPA
DEVNHTDKWSFTTPFVCGATNLGEALRRIAEGAAMIRSKGEAGTGNVVEAVRHMRQIKGD
IGRLRALDNHELYAAAKELRAPYELVREVAELGKLPVVLFSAGGVATPADAALMRQLGAE
GVFVGSGIFKSGDPAQRAAAIVKATTFYDDPKVIAEVSRGLGEAMVGINIDTLPDTERYA
GRGW
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcacgtcccccagcacccctcagactcccgagaccggcaccgcccgcgtcaag
cgcggcatggccgagcagctcaagggcggcgtgatcatggacgtcgtcacccccgagcag
gccaagatcgccgaggacgccggcgccgtcgccgtcatggccctggagcgggtcccggcc
gacatccgcaaggacggcggcgtggcccgcatgtccgaccccgacatgatcgacggcatc
atcgaggccgtctccatccccgtgatggccaagtcccgcatcggccacctggtggaggcc
caggtcctccaggcgctgggcgtggactacatcgacgagtccgaggtgctcaccccggcc
gacgaggtcaaccacaccgacaagtggtccttcaccacgcccttcgtctgcggcgccacc
aacctgggcgaggccctgcgccggatcgccgagggcgccgccatgatccgctccaagggc
gaggccggcaccggcaacgtcgtcgaggcggtccgccacatgcggcagatcaagggcgac
atcggccggctgcgtgccctggacaaccacgagctgtacgccgccgccaaggagctgcgc
gccccgtacgaactggtccgcgaggtcgccgagctgggcaagctccccgtggtgctgttc
tccgccggtggcgtcgccacccccgccgacgccgcgctgatgcgccagctgggcgccgag
ggcgtcttcgtcggctccggcatcttcaagtccggcgacccggcgcagcgcgccgccgcc
atcgtcaaggccaccaccttctacgacgaccccaaggtcatcgcggaggtctcccgcggc
ctgggcgaggccatggtcggcatcaacatcgacaccctgcccgacaccgagcgctacgca
gggcgtggctggtaa
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