Streptomyces harbinensis: HUT13_05770
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Entry
HUT13_05770 CDS
T07389
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03030
DNA replication
shar03430
Mismatch repair
shar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUT13_05770 (dnaE)
03430 Mismatch repair
HUT13_05770 (dnaE)
03440 Homologous recombination
HUT13_05770 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shar03032
]
HUT13_05770 (dnaE)
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_05770 (dnaE)
Enzymes [BR:
shar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUT13_05770 (dnaE)
DNA replication proteins [BR:
shar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUT13_05770 (dnaE)
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUT13_05770 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
B1
Motif
Other DBs
NCBI-ProteinID:
QKV68340
LinkDB
All DBs
Position
1354450..1358001
Genome browser
AA seq
1183 aa
AA seq
DB search
MADNFVHLHVHTEYSMLDGAAKNGKLFAEVERQGMPAVAMSDHGNMFGAYEFFQTAGKTG
VKPIIGIEAYVAPESRFHKKQVFWGGSGRGQDASGEGGKDVSGGGRYTHMTMWAQNAQGL
RNLFRLSSLASFEGYYMKPRMDRELISQYASGIIATTGCPSGEVQTRLRLGQFDEAVKAA
ATYQDIFGKENYFLELMDHGLDIERSVREDLLRIAKQLNIPLLATNDSHYVTEDQADDHD
SLLCVGVGKNKADTNRFKFNGTGYYIKTSAEMRQLFSELPEACDNTLLIAERVESYKEVF
AYEDQMPQFAVPEGETQASWLRKECERGIKERYGDNPDPEVLERLETELSVITPMGFDSY
FLVVSDICKYGRDNGVPVGPGRGSAAGSLVAYLTRITDVDPLKHGLLFERFLNPERINPP
DVDLDFDDRQRDVMVRYLTDKYGEAYTAQVNTFGTIKAKAAVKDANRILGFPFSMGDRIT
KAMPPDVMGKGIPLSGIFDPEHPRYSEASEIRSMYENEPDVKKIIDTARGIEGLIRGTGV
HAAAVILSRTPLLDLIPMHKRDRDGTIITGFSYPDCEEMGLIKMDFLGLRNLGIIDHAIK
IIKENRGIEVDTSSIELDDKPTYELLARGDTLGVFQLDGTAMRSLLRLMQPDRFDDISAV
LALYRPGPMGVDSHTNYALRKIGRQEITPIHPELEEPLREVLDPTYGLIVYQEQVQKAAQ
ILAGYSLGQADLLRRAMGKKKPEVLAKEFVPFQKGCRERGYSDEAIQAVWDVLVPFSGYA
FNKSHTVAYGMVAYWTAYLKANYPAEYMAALLTSVDNDKDKTAVYLAECRRLGIKILSPD
VNESVADFSAIGEDVRFGLQSIRNVGANVIESLVNTRKSKGKYTSFADFLDKSEIVVCNK
RTIDSLIKAGAFDSLGHTRKGLCDIHETAVDAVIPVKKQQAIGQDDLFGSIDTGEDAPTI
GLDFAVSDQEWNRKAKLSLEREMLGLYVSSHPLDGAEHILARSRDTSIAELLGSGRTEGE
AKIAGLITGIDRRLNKQGDPWAIVTIADRDASMEVLFFPKSYALVQHELIDDNVLSVRGR
INERDGAISLFGQEITALDISSAEHGGKPPVLLVLPEHRINGRAIRELKRTLKAHPGDSP
VRLKVEGRQKTTIFELGFLVNPENIASDIKGGFGPSAWAGIAL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaacttcgttcacctgcatgttcacaccgagtactcgatgctcgacggtgcc
gcgaagaacggcaagctgttcgccgaagtcgaacgccaggggatgcccgcggtcgccatg
agcgaccacggcaacatgttcggcgcctacgagttcttccagaccgccggcaagaccggg
gtcaagccgatcatcggcatcgaggcgtacgtcgcgcccgagtcccggttccacaagaag
caggtcttctggggcggcagcggacgcggccaggacgccagcggcgagggcggcaaggac
gtctccggcggtgggcggtacacccacatgaccatgtgggcgcagaacgcccaaggcctg
cgcaacctcttccggctctcctcgctcgcctccttcgagggctactacatgaagccccgc
atggaccgcgagctgatctcccagtacgcctccggcatcatcgccaccaccggatgcccc
tccggcgaggtccagacccgcctgcggctcggccagttcgacgaggccgtcaaggccgcc
gccacgtaccaggacatcttcggcaaggagaactacttcctggaactgatggaccacggc
ctcgacatcgagcgctcggtccgcgaggacctgctccgcatcgccaagcagctgaacatc
ccgctgctggccaccaacgactcgcactacgtgaccgaggaccaggccgacgaccacgac
agcctgctgtgcgtcggcgtgggcaagaacaaggcggacaccaaccgcttcaagttcaac
ggcaccggctactacatcaagacctccgccgagatgcggcagctcttctccgagctgccc
gaagcctgcgacaacaccctgctgatcgccgagcgcgtcgagtcgtacaaggaggtgttc
gcctacgaggaccagatgccgcagttcgcggtccccgagggcgagacccaggccagctgg
ctgcgcaaggagtgcgagcgcggcatcaaggagcggtacggcgacaacccggaccccgag
gtgctggagcgcctggagaccgagctgagcgtcatcaccccgatgggcttcgactcctac
ttcctcgtcgtctccgacatctgcaagtacggccgcgacaacggcgtcccggtcggcccc
ggccgtggctcggccgccggctccctggtcgcgtacctgacccgcatcaccgatgtcgac
ccgctcaagcacggcctgctcttcgagcggttcctcaaccccgagcgcatcaaccccccg
gatgtcgacctcgacttcgacgaccgccagcgcgacgtcatggtgcggtacctcaccgac
aagtacggcgaggcctacaccgcccaggtcaacaccttcggcaccatcaaggccaaggcc
gccgtcaaggacgccaaccgcatcctcggcttccccttctccatgggcgaccgcatcacc
aaggcgatgccgccggacgtcatgggcaagggcatcccgctctccggcatcttcgacccc
gagcacccccggtactccgaggcgtccgagatccgctcgatgtacgagaacgagccggac
gtcaagaagatcatcgacaccgcgcgcggcatcgagggcctcatccgcggcaccggtgtg
cacgccgccgccgtcatcctctcccgcacccccctcctcgacctgatcccgatgcacaag
cgggaccgggacggcacgatcatcaccggcttctcgtatcccgactgcgaggagatgggc
ctgatcaagatggacttcctgggtctgcggaacctgggcatcatcgatcacgccatcaag
atcatcaaggagaaccggggcatcgaggtcgacaccagctccatcgagctggacgacaag
cccacctacgaactgctggcccgcggcgacaccctcggcgtgttccagctcgacggcacc
gccatgcgctccctgctgcgcctgatgcagcccgaccgcttcgacgacatttccgccgtc
ctcgcgctctaccgccccggcccgatgggcgtcgactcgcacaccaactacgcgctgcgc
aagatcggccgccaggagatcaccccgatccacccggagctggaggagccgctgcgggag
gtcctcgaccccacctacggcctcatcgtctaccaggagcaggtgcagaaggccgcccag
atcctcgccgggtacagcctcggccaggccgacctgctgcgccgcgccatgggcaagaag
aagcccgaggtgctggccaaggagttcgtccccttccagaagggctgccgggagcgcggc
tactcggacgaggcgatccaggccgtgtgggacgtcctggtccccttctccggctacgcg
ttcaacaagtcgcacaccgtcgcctacggcatggtcgcgtactggaccgcctatctgaag
gccaactaccccgccgagtacatggcggccctgctcacctcggtcgacaacgacaaggac
aagaccgccgtctacctggcggagtgccgccggctcggcatcaagatcctctcccccgac
gtgaacgagtccgtcgccgacttctccgccatcggcgaggacgtccgcttcggcctccag
tccatccgcaacgtcggcgccaacgtcatcgagtccctggtgaacacccgcaagtccaag
ggcaagtacacctccttcgccgacttcctcgacaagtccgagatcgtggtctgcaacaag
cgcaccatcgactcgctcatcaaggccggcgccttcgactccctgggccacacccgcaag
ggcctgtgcgacatccacgagaccgccgtcgacgccgtcatcccggtcaagaagcagcag
gccatcggccaggacgacctcttcggctccatcgacaccggcgaggacgcccccaccatc
ggtctcgacttcgccgtcagcgaccaggagtggaaccgcaaggccaagctctccctggag
cgcgagatgctcggcctgtacgtctcctcccaccccctggacggcgccgagcacatcctg
gcccgcagccgcgacacctccatcgccgaactgctcggctccggccgcaccgagggcgag
gccaagatcgccggcctgatcaccggcatcgaccgccggctgaacaagcagggcgacccg
tgggccatcgtcacgatcgccgaccgggacgccagcatggaggtgctgttcttccccaag
tcgtacgctctcgtccagcacgagctgatcgacgacaacgtgctctcggtccggggccgc
atcaacgagcgcgacggcgccatcagcctcttcggccaggagatcaccgcgctggacatc
tcctccgccgagcacggcggcaaaccgcccgtcctgctggtcctccccgagcaccggatc
aacggccgcgccatccgcgagctgaagcgcaccctcaaggctcaccccggcgactccccg
gtccgcctcaaggtcgagggccggcagaagaccacgatcttcgagctgggcttcctggtg
aacccggagaacatcgcctccgacatcaagggcggattcggcccctccgcgtgggcgggg
atcgcgttgtga
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integrated database retrieval system
