Streptomyces harbinensis: HUT13_06000
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Entry
HUT13_06000 CDS
T07389
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUT13_06000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_06000
Enzymes [BR:
shar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HUT13_06000
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HUT13_06000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QKV68385
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All DBs
Position
1409797..1410684
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AA seq
295 aa
AA seq
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MTSVSARDRNPLGGHVPVAGGLAARGLSYAAALAAETLQVFVANPRGWATPPGDPAQDEA
FRAGCAQRGLPAYVHAPYLINPGSADPVTAERSVRSLRHSLRRGRAIGARGVVVHTGSAT
GGRSRESALAQTGELLLPLLDELTHEEDPYLLLEPTAGQGASLCSRVADLGPYLAALRHH
PRVGICLDTAHVFAAGHDLAAPDGVAATLDELVEVAGPGRLRLIHANDSKAPAGSRRDRH
ENIGAGHIGQAAFAALLRHPATAGVPLVIETPGGPEGHAADVDRLKELRSAPARG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccgtttccgcgcgcgaccgcaatccactgggcggccacgtccccgtagccggg
ggcctggccgcccgtggtctttcgtacgccgccgccctggccgccgagaccctccaggtg
ttcgtcgccaatccgcgcggctgggccaccccgcccggggacccggcgcaggacgaggcg
ttccgcgccgggtgcgcgcagcgggggctgcccgcgtatgtgcacgcgccgtacctcatc
aacccggggtccgccgatccggtcaccgccgagcgctcggtgcgctcgctgcggcactcg
ctgcgccggggccgggcgatcggcgcgcgcggggtggtcgtccacaccggctcggcgaca
ggcgggcgcagccgggagagcgcgctggcccagaccggtgagctgctgctgccgctgctg
gacgaactcacgcacgaggaggacccgtacctcctcctggagcccaccgccgggcagggc
gcctcgttgtgctcccgcgtcgccgatctcgggccctacctggcggcgctgcgtcaccat
ccccgggtgggcatctgcctggacaccgcccatgtcttcgccgcgggtcacgatctggcc
gccccggacggggtggcggcgacgctggacgaactggtggaggtcgcgggcccgggacgg
ctgcggctgatccacgccaacgactccaaggcaccggccggctcgcgccgcgaccggcac
gagaacatcggcgccggacacatcggacaagcggccttcgccgcgctgcttaggcacccg
gcgacggccggagtgccgctggtcatcgagaccccgggcggcccggagggccatgcggcg
gatgtggaccggctgaaggaactcaggtccgcgccggcgcggggctga
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