Streptomyces harbinensis: HUT13_06750
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Entry
HUT13_06750 CDS
T07389
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shar
Streptomyces harbinensis
Pathway
shar00040
Pentose and glucuronate interconversions
shar01100
Metabolic pathways
shar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HUT13_06750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUT13_06750
Enzymes [BR:
shar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HUT13_06750
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
F5_F8_type_C
Beta_helix
ANAPC10
Motif
Other DBs
NCBI-ProteinID:
QKV68514
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Position
complement(1572355..1573911)
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AA seq
518 aa
AA seq
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MKASVAMTRLWVTMALAALVVATGVVLSVPKAAAATGNATGYASQNGGTTGGAGGQTVRA
TTGTQIHAALCNRASSSTPIIIEVQGTINHGNTSKVSGGSCNTADGVIELKQISNVTLVG
VGNGALFDQVGIHVREASNIIIQNVTVRNVKKSGSPTSNGGDAIGMENNVRNVWVDHVTL
EASGGESEGFDGLFDLKNNTQYVTLSYSILRNSGRGGLVGSSESDLSNGYITYHHNLYQN
IDSRAPLLRGGIAHTYNNHFLSINDSGINSRAGARVRVDNNYFQDSKDVLGTFYTSAAGY
WQVNGNVFDNVRWSSPGGTTNPAGPNPTSNTSVSIPYSYSLDPANCVPGVVAQTAGANKG
NRVSDGSCTPQNPDPGNPGNPDPGNPDPGNPDPGTPGGTNLSLSGDSDGSSKASGTSYGN
VRDNNMNTYWSPTGTTGSISIKWSSATTVSKINIREAAGATGRIGSYRVLNADTGAVLAS
GNGAGVISFPATSVRKITFEITSASGTPQVAEYETYAS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatcagtcgcgatgacgcgactctgggtgaccatggccctggcggccctggtg
gtcgccaccggcgttgtgctgtcggtgccgaaggcagcggcggcgaccggcaacgccacc
ggttacgcgtcccagaacggcggcacgaccggcggggcgggcggccagaccgtccgggcc
accaccgggacccagatccacgcggccctgtgcaaccgggccagcagcagcaccccgatc
atcatcgaggtgcagggcaccatcaaccacggcaacaccagcaaggtgtccggcggcagt
tgcaacacggccgacggcgtgatcgagctcaagcagatcagcaacgtgacgctggtcggt
gtcggcaacggggcgctcttcgaccaggtcggcatccacgtccgcgaggccagcaacatc
atcatccagaacgtgacggtgcggaacgtcaagaagtcgggttctcccacctccaacggc
ggtgacgccatcgggatggagaacaacgtccgcaacgtctgggtcgaccacgtcaccctg
gaggcctccggtggcgaatcggaaggcttcgacgggctgttcgacctgaagaacaacacc
cagtacgtgacgctgtcctacagcatcctgcgcaactcgggccgcggtggcctggtcggg
tcgagtgagagcgacctctcgaacggctacatcacctaccaccacaacctgtaccagaac
atcgactcccgggctccgctgctgcgcggcggcatcgcgcacacctacaacaaccacttc
ctgagcatcaacgactccggcatcaactcccgggccggggcccgcgtcagggtggacaac
aactacttccaggactccaaggacgttctgggcaccttctacacctcggcggccggctac
tggcaggtcaacgggaacgtcttcgacaacgtgcggtggtcgagccccggcggcaccacc
aacccggccggccccaacccgacgtccaacacgtcggtcagcatcccctactcctactcc
ctggacccggccaactgcgtcccgggtgtggtggcgcagacggccggtgccaacaagggc
aaccgggtctccgacggcagctgcaccccgcagaacccggacccgggcaaccccggcaac
cccgaccccggcaaccccgacccgggcaaccccgaccccggcacgcccggcggcaccaac
ctcagcctctcgggcgactccgacggcagcagcaaggccagcggcaccagctacggcaac
gtccgtgacaacaacatgaacacctactggtcgccgaccggcaccaccggctcgatctcc
atcaagtggagctccgccaccaccgtctccaagatcaacatcagggaggcggcgggcgcc
accggcaggatcggctcctaccgggtgctcaacgccgacaccggggccgtcctggcctcc
ggcaacggcgcgggagtcatcagcttccccgccacgtcggtccgcaagatcaccttcgag
atcaccagcgcgagcggcacaccgcaggtcgccgagtacgagacctacgcgagctga
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