Streptomyces harbinensis: HUT13_07750
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Entry
HUT13_07750 CDS
T07389
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
shar
Streptomyces harbinensis
Pathway
shar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HUT13_07750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shar03021
]
HUT13_07750
Transcription machinery [BR:
shar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUT13_07750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
LexA_DNA_bind
Exonuc_VII_L
KORA
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QKV68691
LinkDB
All DBs
Position
complement(1771538..1772545)
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AA seq
335 aa
AA seq
DB search
MSPVQSQILDAPAPAVPVLKPSPPTTAAGASADLFRQYLREIGRIPLLTAAEEVELARRI
EAGLFAEERLAAAADAGEPWDPQLALDLDQLVVRGRRAKRQLIEANLRLVVSVAKRYIGR
GLTMLDLVQEGNLGLIRAVEKFDYARGFKFSTYATWWIRQAMSRAIADQARTIRVPVHVV
ELINRVVRVQRRVLQERGYEPSPAEVGMLLGLTAARVTEILRLAQDPISLQSPVGEEDDV
NLGDLIEDVDIPSPAESAAFLLLREQLEAVLSTLGDRERRVVELRYGLTDGRPRTLEEIG
RLFGVTRERIRQIEHKTLGKLRDHAYANQLRGYLD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcccgtgcagagccagatcctcgacgccccggcaccggccgttccggtgctgaag
ccatccccgcccaccacggccgcgggcgcctcggcggacctcttccgccagtacctgcgg
gagatcggccgcatcccgctgctgacggcggccgaggaagtggaactggcccgccgcatc
gaggcgggccttttcgccgaggagcggctggcagcagcggcggacgccggggaaccgtgg
gacccccagctcgcgctcgacctcgaccagctggtggtccgcgggcgccgggccaagcgg
cagctcatcgaggcgaacctgcggctggtcgtctcggtggcgaaacggtacatcgggcgc
ggcctgaccatgctcgacctggtgcaggagggcaacctcgggctgatccgggcggtggag
aagttcgactacgcccgtggcttcaagttctcgacgtacgccacgtggtggatccgccag
gcgatgtcacgggcgatcgcggaccaggcccggacgatacgggtcccggtgcacgtggtc
gagctgatcaaccgcgtggtgcgggtccagcgccgggtcctccaggaacgcgggtacgag
ccgtccccggccgaggtcggcatgctgctgggcctgacggcggcccgcgtcaccgagatc
ctgcggctcgcgcaggaccccatctccctccagtccccggtgggcgaggaggacgacgtc
aacctcggcgacctcatcgaggacgtggacatcccctcaccggccgaatcggccgcgttc
ctgctgctgcgggagcaactggaggcggtgctgtccacgctcggcgaccgtgaacggcgc
gtggtggaactgcggtacggcctcaccgacggccgcccccgcaccctggaggagatcggc
cggctgttcggcgtcacccgggaacgcatccgccagatcgaacacaagacgctgggcaag
ctgcgggaccacgcgtacgcgaaccagctgcgcggctacctggactga
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