Streptomyces harbinensis: HUT13_08040
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Entry
HUT13_08040 CDS
T07389
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
shar
Streptomyces harbinensis
Pathway
shar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUT13_08040 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_08040 (recO)
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HUT13_08040 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HUT13_08040 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
QKV68742
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Position
complement(1838736..1839485)
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AA seq
249 aa
AA seq
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MSLFRDDGIVLRTQKLGEADRIITLLTRTHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGSELIGRGLPLCTQTETIAAYGQPIVGDYARYTAGTAMLETAERFTDHEGEPNVQQ
YLLLVGGLRTLASGERTPGMVLDAFLLRSLAMGGYAPSFEDCAKCGLPGPNRFFSIAAGG
VICGDCRVPGSVVPSPEALRLLGALLTGDWPAAEAAESRHVREGSGLVSAYLHWHLERGL
RSLRFVEKG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttccgcgacgacggcatcgtgctgcgcacccagaagctgggcgaggcggac
cggatcatcaccctgctcacccgcacccacggacgcgtgcgggcggtggcgcgcggtgtg
cggcgcaccaagtcgaagttcggggcgcgactggaaccgttctcccacgtcgacgtgcag
ttcttcgcgcgcggcagcgagctgatcggccgcggactgccgctgtgcacccagaccgag
accatcgccgcctacgggcagcccatcgtcggcgactacgcccgctacaccgccggcacg
gccatgctggagaccgccgagcgcttcaccgaccacgagggggagcccaacgtccagcag
tacctcttgctggtcggcgggctgcgcaccctcgcgagcggggagcgtacgcccggcatg
gtgctggacgcgttcctgctgcggtcgctggcgatgggcggctacgcgcccagcttcgag
gactgcgcgaagtgcgggctgcccggaccgaaccgtttcttctccatcgccgcgggcggg
gtgatctgcggcgactgccgggtgcccgggagcgtcgtcccctcgcccgaggcgctgcgg
ctgctcggcgcgctgctgacgggcgactggccggcggcggaggccgccgagagccggcac
gtacgggaggggagcgggctggtctccgcgtacctgcactggcatctggagcgcgggctg
cgttcgttgagattcgtggagaagggctga
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