Streptomyces harbinensis: HUT13_08720
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Entry
HUT13_08720 CDS
T07389
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
shar
Streptomyces harbinensis
Pathway
shar00040
Pentose and glucuronate interconversions
shar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HUT13_08720
Enzymes [BR:
shar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
HUT13_08720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
YscW
Motif
Other DBs
NCBI-ProteinID:
QKV72051
LinkDB
All DBs
Position
complement(1989226..1991526)
Genome browser
AA seq
766 aa
AA seq
DB search
MLAAGAGTATAAPAPAASAAQTWEAITFGQSTDLNFATNVLPEKIGTNYAAPEHPGTIDG
TIVMESRGGKLAPGHDGLTFYQTALDAGTTNFVLTADMTVEQFGPETGAAPNSQDSAGIM
VRDVNGAPRQDPMVDGFEEVPAASNIFGAGMMRQGISSLVRTGVTEPWGNPGSALKATPF
TTDSRYTLPVGTPVTLRLERTDSEFVMSATFTHAGEPATFEQRVDGADWVQDIDPDHMYV
GFYAARNAKVSFYNARLELSEADTRPRTPVEPAPVQPALTLHSADRSSSAQYTLRARTNT
AGTLTVTDSKGKKVAQKRLAAGDYFSHPVRLHADSTDFTFTLRPATGAEVTRSLTVTRTA
YGERGNGAVIHAAPTGTAAAPGTAARPVDLETALRNVAPGGQVLLHGGTYEPAGTLNLSA
GYSGLPHKPKTLKPYRGQDVVIDGRGALPVVLRLDADHWRVEGFTITRAASNALRMSGSH
NTISAMTFNYNGDTGFQITGSGDDPAYWPSHNLITGSESHDNRDAGDINADGFAAKLGVG
EGNVFRGNIAHHNIDDGWDLYNRTNEGANMPITLENNVSYANGRLSDGYNEDSNTGNGFK
LGGEGLPVDHVVRGNIAYDNNMDGFSDNFNPGRLTLTNNTAYDNKRFNYLIRFNPYFTPE
EQGVYRNNLSFRTPDGRGGEDPQADFISGDVDRTNVLFDGERAANADGTTLATAADFRSL
GLPAAYPRGRDGTPQHGDFLRPERTSPLNRAGTHRSVIGALDGSRR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
ttgctggccgccggtgcgggcacggcgaccgccgcacccgcaccggcggcgagcgccgca
cagacgtgggaggccatcaccttcggccagtccaccgacctcaacttcgccaccaacgtg
ctgccggagaagatcggcaccaactacgcggcccccgagcaccccggcaccatcgacgga
accatcgtcatggagagccgcggcggcaaactcgcccccggccacgacggactgactttc
taccagaccgccctggacgccggcaccaccaacttcgtgctcaccgccgacatgaccgtc
gagcagttcgggcccgagaccggcgccgcccccaactcgcaggacagcgccggcatcatg
gtccgcgacgtcaacggcgcgccccgccaggacccgatggtcgacggcttcgaggaagtc
ccggccgcctccaacatcttcggcgccggcatgatgcgccagggcatcagctccctggtg
cgcaccggcgtcaccgaaccgtggggcaacccgggcagcgccctgaaggccacccccttc
accaccgactcccgctacaccctgccggtcggcaccccggtcaccctgcggctggagcgt
accgacagcgagttcgtgatgtcggcgaccttcacccacgccggggagcccgccaccttc
gagcagcgggtggacggcgccgactgggtccaggacatcgacccggaccacatgtacgtc
ggcttctacgccgcccgcaacgccaaggtgtccttctacaacgcccggctggagctgagc
gaggcggacacccggccgcgtaccccggtggagccggcgcccgtccagcccgccctcacc
ctgcactccgcggaccggagcagcagcgcccagtacaccctgcgggccaggaccaacacc
gccgggacgctcaccgtcaccgacagcaagggcaagaaggtcgcccagaagcggctggcg
gccggcgactacttctcgcacccggtccggctgcacgccgacagcaccgacttcaccttc
accctgcggccggccaccggcgcggaggtgacccggtcgctgaccgtcacccgcaccgcg
tacggcgagcgcggcaacggcgcggtcatccacgccgcgcccaccggcaccgccgccgcg
cccggtaccgccgcccgcccggtggacctggagaccgcgctgcgcaacgtcgcccccggc
gggcaggtgctgctgcacggcggaacgtacgagccggccggcacactgaacctctccgcc
ggctacagcggactgccgcacaagcccaagacgctcaagccctaccgcggccaggacgtc
gtgatcgacgggcgcggcgcgctcccggtggtgctgcggctggacgccgatcactggcgg
gtggagggcttcaccatcacccgggcggcgagcaacgcgctgcggatgagcggcagtcac
aacaccatcagcgccatgaccttcaactacaacggcgacaccggcttccagatcaccggc
agcggggacgacccggcgtactggccctcgcacaacctgatcaccggcagcgagtcgcac
gacaaccgtgacgccggcgacatcaacgccgatggcttcgcggccaagctcggcgtcggc
gagggcaacgtcttccgcgggaacatcgcccaccacaacatcgacgacggctgggacctg
tacaaccgcaccaacgagggcgccaacatgcccatcaccctggagaacaacgtctcctac
gccaacggccggctctccgacgggtacaacgaggacagcaacaccggcaacggcttcaag
ctcggcggcgagggcctgccggtggaccacgtggtgcgcggcaacatcgcctacgacaac
aacatggacggcttctcggacaacttcaacccgggccgcctcaccctcaccaacaacacc
gcgtacgacaacaagcggttcaactacctgatccgcttcaacccgtacttcacccccgag
gagcagggcgtctaccgcaacaacctgtccttccggacccccgacggccggggcggcgaa
gacccgcaggccgacttcatctccggggacgtggaccgcacgaacgtcctcttcgacggg
gagcgggcggcgaacgcggacgggacgacgctcgccacggccgccgacttccgctcgctc
ggcctgcccgcggcctacccgcgcggccgggacggcacgccgcagcacggcgacttcctg
cggcccgagcgcaccagcccgctgaaccgggcgggcacccaccgttcggtgatcggcgcg
ctggacggctcccggcgctga
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