Streptomyces harbinensis: HUT13_12270
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Entry
HUT13_12270 CDS
T07389
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
shar
Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shar03021
]
HUT13_12270
Transcription machinery [BR:
shar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUT13_12270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_Crp_2
HTH_23
HTH_24
MarR
HTH_10
MarR_2
HTH_36
DUF7343
HTH_AraC
HTH_3
GAAD
KORA
DUF134
GerE
Motif
Other DBs
NCBI-ProteinID:
QKV69471
UniProt:
A0A1I6THE7
LinkDB
All DBs
Position
2757333..2758190
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AA seq
285 aa
AA seq
DB search
MSTSARSASPTAVPPRHRRGRHPHDDAPDTSRQFDRIAALPDGPEREELCQEVICAWMPM
AGRLARNFRDRGESLEDLEQVAALGLVKAVHRYDPGRGCAFESFAVPTIVGEVKRHFRDH
LWGVHVPRRTQELRNQVRAASRQLECRPDDRRPSVAELAEFSGLSEEEVATGLEALESYS
PLSLDAELPGTDDGYSLKDTLGVPDPGFDQVVFREAVKPKLRRLPEREQRILYLRFFDEL
TQSKIADQLGISQMHVSRLLTRICERLQEEIEEDRAGNDEGAGER
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtccgcacgcagtgcgtcccccaccgccgttccgccccgacaccggcgcggc
cggcatccgcacgacgacgcccccgacacctcgcgccagttcgaccgcatcgccgccctg
ccggacgggcccgaacgggaggagctgtgccaggaggtgatctgcgcctggatgccgatg
gccggccggctggcccgcaacttccgcgaccggggcgagtccctggaggacctggaacaa
gtggcggcactcggcctggtcaaagcggtgcaccggtacgatccggggcgcggctgcgca
ttcgagagcttcgcggtgcccaccatcgtcggggaggtcaagcggcatttccgcgaccac
ctgtggggggtgcacgtcccgcggcgcacccaggaactgcgcaaccaggtgcgggcggcg
agccggcagctggagtgccggcccgacgaccggcggccctcggtggcggaactggccgag
ttcagcgggctcagcgaggaggaggtggcgaccggcctcgaagcgctggagagttacagt
ccgctgtcactggacgccgaactcccgggcacggacgacggctactccctcaaggacacg
ctcggagttcccgatcccggattcgaccaggtcgtcttccgggaagccgtcaagcccaaa
ctcagacggctgccggagcgcgagcagcgtattttgtatctccgtttcttcgacgagctg
acccagagcaagatcgcggatcagctcggtatttcccagatgcatgtctcccggctgctg
acccggatctgcgaacgccttcaggaggagatcgaggaggaccgggccggcaacgacgag
ggtgccggtgagcgctga
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