Streptomyces harbinensis: HUT13_13405
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Entry
HUT13_13405 CDS
T07389
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
shar
Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shar03021
]
HUT13_13405
Transcription machinery [BR:
shar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUT13_13405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
MarR
HTH_3
DUF134
HTH_Tnp_4
HTH_37
NirdL-like_HTH
DUF7343
MPAB_Lcp_cat
Motif
Other DBs
NCBI-ProteinID:
QKV69666
UniProt:
A0A7H8H315
LinkDB
All DBs
Position
2996211..2996993
Genome browser
AA seq
260 aa
AA seq
DB search
MAVTQTRGAQARALTQALFEQLDRLEAGTAEHARVRGALIEANVPLVRYAALRFHNRNEP
MEDIVQVGTIGLIHAIDRFDLGRGVQFPTFAMPTIVGEIRRYFRDSVRSVHVPRRLHEMW
AQVRGATEELTVALGRDPNPAEIAERLQVPEEDVLASLEAGSAYRVSSLEAAQERDEGSA
GLVERIGYEDPELAGVEHRALVRHLLVQLPEREQRILLLRYYRNLTQSQISAELGVSQMH
VSRLLTRSFARLRSANPIDA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtgacgcagacccggggcgcccaggctcgggcgctgacgcaggcactgttcgag
cagctcgaccggctggaggccggcaccgccgagcacgcccgggtccgtggagccctgatc
gaggccaatgtgccgctggtgcggtacgcggcgctgcgcttccacaaccgcaacgagccg
atggaggacatcgtccaggtcggcaccatcggcctgatccacgcgatcgaccgcttcgac
ctcgggcgcggtgtgcagttccccaccttcgcgatgcccaccatcgtgggcgagatccgg
cggtacttccgggacagcgtgcgctccgtccacgtaccgcgccggctgcacgagatgtgg
gcccaagtgcgcggcgccaccgaggagctgacggtggcgctgggccgggacccgaacccc
gcggagatcgccgagcggctccaggtcccggaggaggacgtcctggcctcgctggaggcg
ggcagcgcgtaccgggtctcctcgctggaggcggcgcaggagcgcgacgaggggtcggcc
ggcctggtggagcggatcgggtacgaggacccggagctggcgggggtcgaacaccgggcg
ctggtacggcatctgctggtgcagctgccggagcgcgagcagcgcatcctgctgctgcgc
tactaccgcaatctgacccagtcgcagatcagcgcggagctgggcgtctcgcagatgcac
gtctcgcggctgctcaccaggagcttcgcccgtctgcgctccgcaaatccgatcgacgcg
taa
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