Streptomyces harbinensis: HUT13_15560
Help
Entry
HUT13_15560 CDS
T07389
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
shar
Streptomyces harbinensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
Sigma70_ECF
Trypan_PARP
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
QKV70031
LinkDB
All DBs
Position
complement(3438600..3440549)
Genome browser
AA seq
649 aa
AA seq
DB search
MEGSKVPRQREPAPADGPPGAPATDAEDGGAAAGTATGTGTGDESRDTGGRDAEDRAVGP
ADIELVERMRQGDAAAYDELYRRHRDAVRRYARTCCRDADTADDLTNEVFAATLQAVRGG
AGPDTAVRAYLLTAVRRVAADWARSARREQLVEDFAVFAVTAAGARASEEDTLDLGPDVL
AMREAEASLAVQAFRSLPERWQTVLWHTAVEEASPQEVAPLLGLTPNAAAVLAHRAREGL
KQAYLQAHVGHVRVDDGGDCARFADRLGAFARGKLRMRAERGLRKHLEECARCRLAASEV
KDLNETIRTVLPIAVIGWFAAGSSGKLGALLLGAGGAGASASAAAAAGGVGAAGAKGGGA
VAAEGFGSSAKAGAATGVVVVAAAAVLAVALIGGSAEEQPPRASDPPPAAPVMPPAAEEP
PAEPEPEPDPVPDPAPPAPAPAPEPEPERTPAPDPEPAPDPEPEPDPVPEPPAPEPEPEP
EPEPEPEPEPEPEPEPEPEPEPEPDPEPYQLRTLAFDLFSDGTEPAIRLWESGWVWQRDQ
VSIGGRSYPHGITVGGRSSVTIDLNRACVSYRAVAGMDDMNLGLGSAVFSVYGDGERLWR
SEVIRSGDEAVPVEVPLNGVSVLRLETTPDGPLSTLALADWARSEISCR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtggagggttcgaaggtgccccggcagcgggagcccgccccggcggacggccctccgggc
gcgccggccaccgacgcggaggacggcggggccgcggccgggaccgcgaccgggaccggg
accggggacgagagccgggacacgggcggccgggacgcggaggaccgggccgtggggccg
gccgacatcgagctggtcgagcggatgcggcagggggacgcggcggcgtacgacgagttg
taccggcgccaccgggacgcggtgcgccggtacgcccgtacctgctgccgggacgccgac
acggccgacgatctgaccaacgaggtcttcgcggccacgctccaggcggtacgtggcggc
gccggtccggacacggcggtgcgcgcgtacctgctgacggcggtgcggcgggtggccgcc
gactgggcgcggtccgcccggcgcgagcaactggtcgaggacttcgcggtgttcgcggtg
acggcggcgggggcgcgcgccagcgaggaggacaccctcgatctgggccccgatgtgctg
gcgatgcgcgaggccgaggcgtcgctggccgtccaggcgttccgttcgctgccggagcgc
tggcagaccgtgctgtggcacacggccgtcgaggaggcgtcgccgcaggaggtggcgccg
ctgctggggctgacgccgaacgcggcggcggtgctcgcgcaccgggccagggaagggctc
aagcaggcgtatctccaggcccacgtgggccatgtgcgggtggacgacggcggggactgc
gcgcggttcgccgaccggctgggggcgttcgcccggggcaagctgcggatgcgggcggag
cgcgggctgcgcaagcatctggaggagtgcgcccggtgccggctggcggcctccgaggtg
aaggacctgaacgagacgatccgtacggtgctgccgatcgcggtcatcggctggttcgcg
gcgggctcctcgggcaagctcggcgcgctgctgctgggagcgggcggggcgggtgcctcg
gcgagcgccgcggcggcggccggcggggtcggcgcggcgggggccaagggcggtggcgcg
gtggccgccgaggggttcgggtcgtcggcgaaggccggggccgccaccggggtggtggtg
gtcgcggcggcggccgtgctggccgtggcgctgatcggcggttcggccgaggagcagccg
ccgcgcgcgtccgacccgccaccggccgctccggtgatgccgccggccgccgaggagccc
ccggcggagcccgaaccggagcccgatcccgtaccggacccggcgccacccgccccggcg
cccgcgccggagcccgagccggagcgcacgcccgcgcccgaccccgaacccgcgccggac
ccggagcccgagcccgatcccgtaccggagccgcccgccccggaacccgagcccgagccc
gagcccgagcccgagccggaacccgaaccggaacccgaaccggaacccgaaccggaaccc
gagcccgagccggaccccgagccgtaccagctgcgtacgctcgccttcgacctgttcagc
gacggcaccgagccggcgatccggctctgggagagcggctgggtgtggcagcgcgaccag
gtgtcgatcggcgggcgatcgtacccgcacggcatcacggtcggcgggcgctcctcggtg
accatcgacctcaaccgcgcctgtgtctcctaccgcgcggtggccgggatggacgacatg
aacctgggcctgggctccgcggtgttcagcgtgtacggggacggcgagcggctgtggcgt
tcggaggtgatccgcagcggcgacgaggcggtgccggtggaggtgccgctgaacggggtg
tcggtcctgcggctggagaccacaccggacgggccgctgagcacgctggcgctggccgac
tgggcgcgttcggagatcagctgtcgctga
DBGET
integrated database retrieval system
