Streptomyces harbinensis: HUT13_16390
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Entry
HUT13_16390 CDS
T07389
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUT13_16390 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shar03019
]
HUT13_16390 (groL)
03110 Chaperones and folding catalysts [BR:
shar03110
]
HUT13_16390 (groL)
03029 Mitochondrial biogenesis [BR:
shar03029
]
HUT13_16390 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shar04147
]
HUT13_16390 (groL)
Enzymes [BR:
shar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HUT13_16390 (groL)
Messenger RNA biogenesis [BR:
shar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HUT13_16390 (groL)
Chaperones and folding catalysts [BR:
shar03110
]
Heat shock proteins
HSP60 / Chaperonin
HUT13_16390 (groL)
Mitochondrial biogenesis [BR:
shar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HUT13_16390 (groL)
Exosome [BR:
shar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HUT13_16390 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HUT13_16390 (groL)
Exosomal proteins of breast cancer cells
HUT13_16390 (groL)
Exosomal proteins of colorectal cancer cells
HUT13_16390 (groL)
Exosomal proteins of bladder cancer cells
HUT13_16390 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
QKV70171
LinkDB
All DBs
Position
3608302..3609927
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFNEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDSYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
AAVEKVSEALLGQAKEVETKEQIASTASISAGDIQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEAELEDPYILIVNSKVSNVKDLLPLLEKVMQ
AGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLTDIAILTGGQVIS
EEVGLKLENAGLDLLGRARKVVITKDETTIVDGAGDSDQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
ASALDKLDLEGDEATGAAAVKLALEAPLKQIAVNAGLEGGVVVEKVRNLPQGHGLNAATG
EYVDLLAAGIPDPTKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcaacgaggaggcgcggcgcggccttgagcgcgggatgaac
cagctcgccgacgccgtcaaggtcacgctcggtcccaagggccgcaacgtcgttctggag
aagaagtggggcgcccccacgatcacgaacgacggtgtctccatcgccaaggagatcgag
ctggaggactcctacgagaagatcggcgccgagctggtcaaggaggtcgccaagaagacc
gacgacgtcgcgggtgacggtacgaccaccgccaccgtgctggctcaggccctggtccgt
gagggtctgcgcaacgtcgccgccggcgccaacccgatggccctgaagcggggcatcgag
gccgccgtcgagaaggtctccgaggcgctgctcggccaggccaaggaggtcgagaccaag
gagcagatcgcctccaccgcctccatctccgccggcgacatccagatcggcgagctgatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgcagacc
ttcggtctcgagctggagctcaccgagggcatgcgcttcgacaagggctacatctccgcc
tacttcgcgaccgacatggagcgcatggaggccgagctggaggacccctacatcctcatc
gtcaactccaaggtcagcaacgtgaaggacctccttccgctgctggagaaggtcatgcag
gccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtccacgctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggcgcccggcttcggt
gaccgccgcaaggccatgctgaccgacatcgccatcctcaccggtggccaggtcatctcc
gaggaggtcggcctcaagctggagaacgcgggcctggacctgctcggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggtgccggcgacagcgaccaggtc
cagggccgggtcaaccagatccgcgccgagatcgagaactccgactcggactacgaccgc
gagaagctccaggagcgtctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gccaaggccgccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcc
gcctccgcgctggacaagctggacctggagggtgacgaggcgaccggtgccgccgccgtc
aagctcgccctggaggccccgctgaagcagatcgcggtcaacgccggtctcgaaggcggc
gtcgtggtcgagaaggtccgcaacctgccgcagggtcacggcctgaacgccgcgaccggc
gagtacgtcgacctgctggccgccgggatccccgacccgaccaaggtcacccgctccgcg
ctgcagaacgccgcctccatcgcggcgctcttcctcaccaccgaggccgtcatcgcggac
aagccggagaaggcggcggccccggccggcgacccgaccggtggcatgggcggcatggac
ttctga
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