Streptomyces harbinensis: HUT13_17210
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Entry
HUT13_17210 CDS
T07389
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03420
Nucleotide excision repair
shar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUT13_17210 (pcrA)
03430 Mismatch repair
HUT13_17210 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_17210 (pcrA)
Enzymes [BR:
shar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUT13_17210 (pcrA)
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUT13_17210 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HUT13_17210 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Tn7_Tnp_TnsA_C
Motif
Other DBs
NCBI-ProteinID:
QKV70314
LinkDB
All DBs
Position
3779267..3781705
Genome browser
AA seq
812 aa
AA seq
DB search
MSGLFDDSVLADLVPPGAEAPPPPPEDDAGHGEEEVPHELFAMSSEVSQRDVYYRNGALK
PVTDPAQLLDGLNEQQRAAVTHSGTPLLIVAGAGSGKTRVLTHRIAYLLAARGAHPGQIL
AITFTNKAAGEMKERVADLVGPRAAAMWVMTFHSACVRILRRESKHLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKRFPPKSFSAKVSNLKNELIDEETFAGQASDGFEKTLAEAYALY
QSRLREANALDFDDIIMTTVHLLQAFPDIAEHYRRRFRHILVDEYQDTNIAQYTLIRELV
GTEDPGELCVVGDADQSIYAFRGATIRNILQFEEDYPQATTLLLEQNYRSTQTILSAANA
VIERNESRRPKNLWTRAGSGARITGYVADTEHDEAQFVADEIDRLTDAGDAKPGDVAVFY
RTNAQSRVFEEVFIRVGLPYKVVGGVRFYERREVRDVLAYLRVLANPEDTVPLRRILNVP
KRGIGDRAEAMLEALAQREKISFAQALARVDEAYGMAARSMNAVKRFNVLLEELRTIAES
GAGPATVLEAVLEQTGYLAELQSSTDPQDETRVENLQELASVALEFEQQREDESPGTLAE
FLERVALVADSDEIPDETEGEDKGVITLMTLHTAKGLEFPVVFLSGMEDGVFPHLRSLGK
TKELEEERRLAYVGITRARERLYVTRAALRSAWGQPQHNPPSRFLEEIPEQHLDWRRTGP
LAAAPPPPLSSVRRGTSTGAAGGFATGRAPARGGTARQVVELAAGDRVSHDSFGLGRVVS
VQGSGDRAEATIDFGGEKPKRLLLRYAPVEKL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctctttgacgacagtgttctggcggacctcgtacccccgggtgcggaggcg
cctccgcctccccccgaggacgacgcgggccacggggaggaggaggtcccccatgagctg
ttcgccatgtcgtccgaggtgtcccagcgcgacgtgtactaccgcaacggcgccctcaag
ccggtcaccgacccggcccagctgctcgacgggctgaacgagcagcagcgcgccgccgtc
acccacagtggtacgccgctgctcatcgtggccggcgccggctccggcaagacccgggtc
ctcacccaccgcatcgcctatctgctggccgcgcgcggcgcccaccccggccagatcctc
gccatcaccttcaccaacaaggcggcgggcgagatgaaggaacgggtcgccgatctcgtc
ggcccgcgcgccgccgcgatgtgggtgatgaccttccacagcgcctgcgtgcgcatcctg
cgccgggagagcaagcatctcgggttcacctccagcttctccatctacgacgccgccgac
tccaagcggctgatggcgctggtctgccgcgacctggacctggaccccaagcggttcccg
cccaagtcgttcagcgccaaggtctccaacctcaagaacgagctgatcgacgaggagacc
ttcgccggacaggcgagcgatggcttcgagaagaccctggccgaggcgtacgcgctctac
cagtcccggctgcgcgaggccaacgcgctggacttcgacgacatcatcatgaccaccgtc
catctgctccaggcgttccccgacatcgccgagcactaccggcggcggttccggcacatc
ctggtggacgagtaccaggacaccaacatcgcccagtacaccctcatccgcgagctcgtc
ggcaccgaggaccccggcgagctgtgcgtggtgggcgacgccgaccagtccatctacgcc
ttccggggcgccaccatccgcaacatcctccagttcgaggaggactacccgcaggccacc
accctgctgctggagcagaactaccgctccacccagaccatcctctccgccgccaacgcc
gtcatcgagcgcaacgagagccgccgcccgaagaacctgtggacccgggccggctccgga
gcccggatcaccggctacgtcgcggacaccgagcacgacgaggcccagttcgtcgccgac
gagatcgaccggctcaccgacgccggcgacgccaagccgggcgacgtcgccgtcttctac
cgcaccaacgcccagtcccgggtcttcgaagaggtcttcatccgggtcgggctgccgtac
aaggtcgtcggcggcgtccgcttctacgagcgccgcgaggtccgcgacgtcctcgcctat
ctgcgggtgctggccaacccggaggacaccgtcccgctgcgccgcatcctcaacgtcccc
aagcgcggcatcggcgaccgcgccgaggcgatgctggaggcgctcgcccagcgcgagaag
atctccttcgcgcaggcgctcgcgcgggtggacgaggcgtacggcatggcggcccgttcc
atgaacgccgtcaagcgcttcaatgtgctgctggaggaactgcgcacgatcgccgaatcc
ggcgcgggaccggccaccgtcctggaagccgtcctcgaacagacgggctatctggcggag
ttgcagtcctccaccgacccgcaggacgagacccgggtggagaacctccaggagctggcc
tccgtcgccctggagttcgagcagcagcgcgaggacgagagccccggcacgctggccgag
ttcctggaacgggtggcgctggtcgccgactccgacgagatcccggacgagacggagggc
gaggacaagggcgtcatcacgctcatgaccctgcacaccgccaagggcctggagttcccg
gtggtgttcctcagcggcatggaggacggcgtcttcccgcatctgcgctccctcggcaag
accaaggagctggaggaggagcgccggctggcgtacgtgggcatcacccgggcgcgcgag
cggctgtacgtgacccgggccgcgctgcgcagcgcctggggccagccgcagcacaacccg
ccctcccgcttcctggaggagatccccgagcagcacctggactggcgccgcaccggcccg
ctggcggcggcgcccccgcccccgctgagttccgtgcggcgcggcacctccaccggggcg
gcgggcggcttcgccaccggccgggcgcccgccaggggcggtacggcgcggcaggtggtc
gagctggcggccggggaccgggtcagccacgactcgttcggcctgggccgggtcgtctcg
gtgcagggcagcggcgaccgggcggaggcgaccatcgacttcggcggcgagaagcccaag
cggctgctgctccgttacgccccggtggagaagctttga
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