Streptomyces harbinensis: HUT13_18630
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Entry
HUT13_18630 CDS
T07389
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03420
Nucleotide excision repair
shar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUT13_18630
03430 Mismatch repair
HUT13_18630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_18630
Enzymes [BR:
shar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUT13_18630
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUT13_18630
MMR (mismatch excision repair)
Other MMR factors
HUT13_18630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QKV70563
LinkDB
All DBs
Position
4080719..4084075
Genome browser
AA seq
1118 aa
AA seq
DB search
MAARLTHPRELRELLGIPFTPEQLACITAPPAPQAIVAGAGSGKTTVMAARVVWLTGTGQ
VAPERVLGLTFTNKAAGELAERVRKALTRAGIGQETTDTGEGGGEPQISTYHAFAGRLLK
EHGLRLGIEPASRLLADAGRFQLAAEVLRAAPASFEPPGSGFTTLVTDLIALDGELAEHL
VPPGRLRAFDRDLLAELDATALTNADLRRIREAAAGRGQLLDVVEEYRARKRARDLIDFG
DQIALAATLARDIPEVGRALREEYGVVLLDEYQDTSVAQRILLAGLFGDGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFPAPDGTPARRYSLSENRRSGGRLLRLANDLAAPLRAL
HPAVVPLRPAEDAEHTGRVHCALLPTHADELAWLADSLAHLVRTGTPPGEIAVLCRTAGD
FAEIQRALVERDVPVEVVGLSGLLHLPEIADLVAVCEVLADPTANAALVRVLTGPRWRIG
PRDLALLGRRARHLVRRTASGEDDTDRLAAAVEGTDPAETTSLADALDTFIGEDRDDADE
LPFSAEARVRFAHLAAEIRDLRRSLADPLMDVLHRVLAVTGLEVELSASPQALAARRRET
LTAFLDLAAAFAAGRTGVAVDGERLGGSLTAFLAFLRAAAQYDKGLDSSLPGGENTVKVL
TAHKAKGLEWDVVAVPGLCAGQGGFPSPQARDSWLKHPRALPHPLRGDAATLPAISGWTA
AAYKEYAGLLAGHLLHEELRLGYVAFTRPRRLLLGSGHWWGPSQKKKRGPSAFLEALRAH
CEADPAHGEVEHWADAPDDEEENPALAEPTEERAWPLPLEPVALERRRAAADRVLDLLRE
GFREPAAEAADPAEAAAPSAPAPSAPAPSAAGPPPQLTAEERRTVESWDRDLDALAGELR
RAREGVREVPLPVSLSATQVQRLASDPEGFARELARPMPRPPQPAARRGTRFHAWVESRF
EELPLPMLGPDELPGGGADGDGEEIADERELAALKEAFGRTEYARRTPYRIEAPFQLRLA
GRVIRGRIDAIYRTDDERGERYEIIDWKTARRQDADPLQLAIYRLAWAERRGLPLGRVTA
AFLYVRSGEVVRPSVLPGRAGLERLLLGEESWEPNDPG
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcacgactgacccatccccgggaactgcgcgagctgctcgggatcccgttcacc
cccgagcagttggcgtgcatcaccgcaccccccgccccgcaggccatcgtggccggcgcc
ggctcgggcaagaccaccgtcatggccgcccgcgtggtgtggctcaccggcaccggccag
gtcgcccccgagcgcgtcctcggcctcaccttcaccaacaaggccgccggcgaactcgcc
gaacgcgtgcgcaaggccctcacccgggccggcatcggccaggagaccaccgacaccggc
gaaggcggcggcgagccgcagatctccacctaccacgccttcgccggccgcctcctcaag
gagcacgggctgcggctcggcatcgagcccgcctcccggctgctcgccgacgccggacgg
tttcagctggccgccgaggtgctgcgcgccgcgcccgcgtccttcgagccgcccggcagc
ggcttcaccaccctcgtcaccgacctcatcgccctcgacggcgaactggccgaacacctc
gtgccccccgggcggctgcgcgccttcgaccgcgacctcctcgccgaactcgacgccacc
gccctcaccaacgccgacctgcggcgcatccgcgaggccgccgccgggcgcgggcagctg
ctggacgtggtcgaggagtaccgggcccgcaaacgcgcccgcgacctcatcgacttcggc
gaccagatcgccctcgccgccaccctcgcccgcgacatccccgaggtcggccgggcgctg
cgcgaggagtacggcgtggtcctcctcgacgagtaccaggacacctccgtcgcccagcgc
atcctgctcgccggcctgttcggcgacggcaccggccaccccgtcaccgccgtcggcgac
ccctgccaggccatctacggctggcgcggcgcctccgtcgccaacctcgacgacttcccc
gagcacttccccgcccccgacggcacccccgcccggcgctactccctcagcgagaaccgc
cgcagcggcggccggctgctgcggctggccaacgacctcgccgcaccgctgcgcgccctg
caccccgccgtcgtcccgctgcgcccggccgaggacgccgagcacaccggccgcgtccac
tgcgccctgctgcccacccacgcggacgaactggcctggctcgccgactccctcgcccac
ctggtgcgcaccggcaccccgccgggggagatcgccgtgctgtgccgcacggccggcgac
ttcgccgagatccagcgcgccctggtggaacgcgacgtgccggtcgaggtcgtcggcctg
tccgggctgctccacctgccggagatcgccgacctggtcgccgtctgcgaggtgctcgcc
gaccccaccgccaacgccgcgctcgtccgggtgctcaccgggccgcgctggcgcatcggc
ccgcgcgatctcgccctgctcggccgccgggcccggcacctggtgcgccgcaccgcgtcc
ggtgaggacgacaccgaccggctcgccgccgccgtggagggcaccgaccccgccgagacc
acctcgctcgccgacgcgctggacaccttcatcggcgaggaccgggacgacgcggacgag
ctgccgttctccgccgaggcccgggtacggttcgcgcacctcgccgccgagatccgcgac
ctgcgccgctcgctcgccgacccgctcatggacgtgctgcaccgggtgctggccgtcacc
ggcctcgaagtggagctctccgcctccccgcaggcgctggccgcccgccgccgcgagacc
ctcaccgccttcctcgacctggccgccgcgttcgccgccggccgcaccggcgtggccgtg
gacggcgaacggctcggcggctcgctcaccgccttcctggcgttcctgcgcgccgccgcc
cagtacgacaagggcctggacagctcgctgcccggcggcgagaacaccgtcaaggtgctc
accgcgcacaaggccaagggcctggagtgggacgtcgtcgccgtccccgggctctgcgcg
ggccagggcggcttcccgtccccgcaggcccgcgactcctggctgaagcacccgcgcgcc
ctgccccacccgctgcgcggggacgccgccacgctgccggcgatcagcggctggacggcc
gccgcgtacaaggagtacgccgggctgctggccggccatctgctgcacgaggagctgcgt
ctgggctacgtcgccttcacccggccgcgccgcctgctgctgggctccgggcactggtgg
gggccgagccagaagaagaaacgcggcccctccgcgttcctggaggcgctgcgcgcgcac
tgcgaggccgacccggcgcacggtgaggtggagcactgggcggacgcccccgacgacgag
gaggagaatccggcgctcgccgagcccaccgaggaacgcgcctggccgctgccgctggag
ccggtcgccctggagcgccgccgggccgccgccgaccgggtgctcgatctgctgcgcgag
gggttccgcgagccggcggcggaagcggcggacccggcggaggccgccgcgccgtccgcc
cccgcgccgtccgcccccgcgccgtccgccgccggcccgccgccgcagctgaccgcggag
gagcggcgcacggtggagtcctgggaccgggacctggacgccctggccggcgagctgcgc
cgggccagggagggcgtccgggaggtgccgctgccggtgtcgctgtccgcgacacaggtg
cagcgcctggcgtccgacccggagggcttcgcccgcgaactggcccggccgatgccgcgc
ccgccgcagcccgccgcccgccggggcacccgcttccacgcctgggtggagtcgcggttc
gaggaactgccgctgccgatgctcggccccgacgagctgccgggcggcggcgcggacggt
gacggggaggagatcgcggacgagcgggagctggcggcgctgaaggaggcgttcggccgg
accgagtacgcccgccgcaccccgtaccggatcgaggcgccgttccagctgcggctggcc
gggcgggtgatccggggccggatcgacgccatctaccgcaccgacgacgagcgcggcgag
cgctacgagatcatcgactggaagaccgcgcgccgccaggacgccgacccgctccagctg
gcgatctaccggctggcgtgggcggagcggcgcggcctgccgctcggccgggtgacggcg
gccttcctgtacgtccgcagcggggaggttgtacggcccagtgtgctccccgggcgggcc
ggtcttgagcggctgctgctgggggaggagtcctgggagccgaacgaccccggttag
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