KEGG   Streptomyces harbinensis: HUT13_19935
Entry
HUT13_19935       CDS       T07389                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
shar  Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:shar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shar03021]
    HUT13_19935
Transcription machinery [BR:shar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HUT13_19935
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_24 MarR_2 DUF7343 NirdL-like_HTH HTH_AsnC-type HTH_10 Sigma70_ECF MarR HTH_3 HTH_Crp_2 IF2_N GerE HTH_5 HTH_AraC HTH_29 PF0095-like_C DUF4423 LexA_DNA_bind HNF-1_N
Other DBs
NCBI-ProteinID: QKV72273
UniProt: A0A7H8H6K3
LinkDB
Position
complement(4359768..4360532)
AA seq 254 aa
MPDPQDRGAARDLFIELRGLPDGSPQRAELRNALVRMHLPLVEHLARRFRNRGEPLDDLT
QVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLSLST
ATAELSQQHGRAPTVHELAQRLNISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTL
GAEDDALEGVEYRESLKPLLEELPPREKKILLLRFFGNMTQSQIAQEVGISQMHVSRLLA
RTLAQLRDKLLVEE
NT seq 765 nt   +upstreamnt  +downstreamnt
ctgcccgatccccaggaccgcggcgccgcccgcgatctcttcatcgaactgcgcgggctc
cccgacggctcgccgcagcgcgccgagctgcgcaacgccctggtacggatgcatctgccg
ctggtcgagcatctggccaggcggttccgcaaccgcggtgagccgctggacgatctgacc
caggtcgccaccatcgggctgatcaagtcggtcgaccgcttcgacccggagcgcggggtg
gagttctccacctacgccacccccaccgtggtcggggagatcaaacggcacttccgggac
aagggctgggcggtccgggtgccgcgccggctccaggagctgcggctctcgctgtccacg
gcgaccgccgagctgtcccagcagcacggccgggcgccgacggtgcacgagctggcccag
cggctgaacatctccgaggaggaggtgctggagggtcttgagtcggcgaacgcctacagc
acgctgtccctcgacgtccccgacaccgacgacgaatcgcccgccgtggcggacaccctg
ggcgcggaggacgacgcgctggagggtgtggagtaccgcgaatccctcaagcccctgctg
gaggagctgccgccgcgcgagaagaagatcctgctgctgcgcttcttcggcaacatgacg
cagtcgcagatcgcgcaggaggtcgggatctcgcagatgcacgtctcccggctgctggcc
cgcacgctggcgcagctgcgggacaagctgctcgtggaggagtga

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