Streptomyces harbinensis: HUT13_20475
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Entry
HUT13_20475 CDS
T07389
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
shar
Streptomyces harbinensis
Pathway
shar00300
Lysine biosynthesis
shar00470
D-Amino acid metabolism
shar01100
Metabolic pathways
shar01110
Biosynthesis of secondary metabolites
shar01120
Microbial metabolism in diverse environments
shar01230
Biosynthesis of amino acids
Module
shar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUT13_20475 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUT13_20475 (lysA)
Enzymes [BR:
shar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HUT13_20475 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DLH
Motif
Other DBs
NCBI-ProteinID:
QKV70873
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All DBs
Position
4480950..4482344
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AA seq
464 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYSAPPTDLNALDPKVWARTVERRADGVLTVGGVGVDRLAD
THGTPAYILDESDFRARCRAWRQAFGDDADVFYAGKAFLSRAVVRWLREEGLNLDVCSGG
ELATALAAGMPASAIAFHGNNKSAAEIRRAVEAGVGRIVVDSYEEIDRVVAAARELGVRQ
PVLVRVTVGVEAHTHEFIATAHEDQKFGLALAGGTALEGIRRVLAAEDGLELLGVHSHIG
SQIFDLAGFEVSARRVVQLMGTVRDEFGVTLPEIDLGGGLGIAYTAGDDPLEPADIAKTL
RDIVERECAAAGLAVPRLSVEPGRAIIGPSAFTLYEVGTVKPLEGLRTYVSVDGGMSDNI
RTALYDAEYSVALVSRTSQALPMLVRVVGKHCESGDIVVRDAYLPADLAPGDLIAVAATG
AYCRSMASNYNHVLRPPVVAVTEGEDRVIVRRETEEDLLRLDVG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccaccccgccgggccccgccacgccgacgtgctgcccgagggccac
tacagcgccccgcccaccgacctcaacgccctggaccccaaggtctgggcccgcaccgtc
gaacgccgcgccgacggcgtcctcaccgtcggcggcgtcggcgtcgaccggctcgccgac
acccacggcacccccgcctacatcctcgacgagagcgacttccgcgcccgctgccgcgcc
tggcggcaggcgttcggcgacgacgccgacgtcttctacgccggcaaggcgttcctctcc
cgcgccgtcgtgcgctggctgcgcgaggaagggctcaacctcgacgtctgctccggcggc
gaactggccaccgccctcgccgccggcatgcccgcgagcgccatcgccttccacggcaac
aacaagtcggccgccgagatccgccgcgccgtagaagccggggtcggacgcatcgtcgtc
gactcctacgaggagatcgaccgcgtcgtcgccgccgcccgcgagctgggcgtacggcag
ccggtactggtccgggtgacggtcggtgtcgaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcggcctcgcgctggccggcggcaccgcgctggagggcatc
cgccgcgtgctcgctgccgaggacggcctggaactcctcggcgtccactcccacatcggt
tcgcagatcttcgacctcgccgggttcgaggtctccgcccgccgcgtggtgcagctgatg
ggcaccgtccgcgacgagttcggggtgaccctgcccgagatcgacctcggcggcggcctc
ggcatcgcctacaccgccggcgacgacccgctggagcccgccgacatcgccaagacgctg
cgcgacatcgtcgagcgcgagtgcgccgccgccgggctggccgtcccccggctgtccgtc
gagccgggccgggccatcatcggcccctccgcgttcaccctctacgaggtcggcaccgtc
aagccgctggagggcctgcgcacctacgtcagcgtcgacggcggcatgtcggacaacatc
cgcaccgccctgtacgacgccgagtactcggtggcgctggtctcccgcacctcccaggca
ctgcccatgctggtgcgagtggtcggcaagcactgcgagagcggcgacatcgtggtccgc
gacgcctacctgcccgccgacctggcccccggcgacctgatcgcggtggccgccaccggc
gcctactgccgttcgatggccagcaactacaaccacgtgctgcgcccgcccgtcgtcgcc
gtcaccgagggcgaggaccgggtgatcgtccggcgcgagaccgaagaggacctgctgcgg
ctcgacgtcggctga
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