Streptomyces harbinensis: HUT13_21895
Help
Entry
HUT13_21895 CDS
T07389
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
shar
Streptomyces harbinensis
Pathway
shar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUT13_21895 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_21895 (mutM)
Enzymes [BR:
shar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HUT13_21895 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HUT13_21895 (mutM)
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUT13_21895 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
NFACT_N
DZR
Motif
Other DBs
NCBI-ProteinID:
QKV71116
LinkDB
All DBs
Position
4781426..4782286
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLDRWVSGRVIASVSTLHPRAIRRHAAGADDFAARLTGAEIAAARRRG
KYLWLPLADGELAVLAHLGMSGQLLIQPAAAPDERHLRIRITFTDPAEGELRFVDQRTFG
GLSLHPLTDGGLPEVIAHIARDPMDAEFDEDAFHAALRRRRTTVKRALLDQSLISGVGNI
YADEALWRTRLHYERPTASLTRPRTAELVTHIREVMNEALAQGGTSFDSLYVNVNGESGY
FDRSLDAYGREDEPCRRCGTPIRRRPWMNRSSYYCPRCQRPPAAGS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgagctgcccgaggtcgaggtggtccggcgcggtctcgaccgctgggtgagtggc
cgggtgatcgcgtcggtgagcacgctgcacccgcgggcgatccgccgccacgcggcgggc
gccgacgacttcgccgcccggctcaccggcgccgagatcgccgcggcacggcggcgcggc
aagtatctgtggctgccgctggcggacggcgagctggccgtgctggcccatctgggcatg
agcggtcagttgctgatccagccggcggcggcgccggacgagcggcatctgcggatccgg
atcaccttcaccgatccggcggagggcgagctgcgcttcgtcgaccagcgcacgttcggc
ggcctgtcgctgcacccgctcacggacggtgggctgcccgaggtgatcgcgcacatcgcg
cgggacccgatggacgcggagttcgacgaggacgccttccacgcggcgctgcgccggcgg
cgtaccaccgtgaagcgggcgctgctggaccagtcgctgatcagcggcgtcggcaacatc
tacgcggacgaggcgctgtggcggacccggctgcactacgaacggcccaccgcgtcgctc
acccggccgcggacggcggagctggtcacccacatccgtgaggtgatgaacgaggcgctc
gcccagggcggcaccagtttcgacagtctgtatgtgaatgtgaacggcgagtcggggtac
ttcgaccgctcgctggacgcgtacgggcgcgaggacgagccgtgccgccgctgcggtacg
ccgatccgccgccgtccctggatgaaccgctccagctactactgcccgcgctgccagcgc
ccgcccgcggcggggagctga
DBGET
integrated database retrieval system
