Streptomyces harbinensis: HUT13_22390
Help
Entry
HUT13_22390 CDS
T07389
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shar
Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shar03016
]
HUT13_22390 (truB)
Enzymes [BR:
shar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HUT13_22390 (truB)
Transfer RNA biogenesis [BR:
shar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HUT13_22390 (truB)
Prokaryotic type
HUT13_22390 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QKV71207
LinkDB
All DBs
Position
4898197..4899129
Genome browser
AA seq
310 aa
AA seq
DB search
MSKASGGPDGIVVVDKPAGHTSHDVVAQLRGIARTRRVGHAGTLDPMATGVLVLGLGQAT
KLLGHLALTEKEYLGVIRLGQNTVTDDAEGEFTGGAGAPGVDRAALDAAVAALTGDILQV
PASVSAIKVDGKRSYKRVREGEDVALPARPVTVRSFDVHQVSAAVAEDGTPVTDVTVGVV
CSSGTYIRALARDLGAALGTGGHLTALRRTRVGPYGLAGPGGARTLDALRAELTVLPLAD
AAAAAFPRWDVDERQARLIGNGVRIAATGLPDGPVAVFGPQGDLVALIDAAGDARAKSLA
VFAAPAASPS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccagcggtggcccggacgggatcgtcgtcgtcgacaaacccgccgggcac
acctcgcacgacgtggtggcgcagctgcgcggcatcgcccgtacccgtcgcgtcgggcac
gccgggaccctggacccgatggccaccggcgtcctggtgctggggctgggccaggccacc
aagctcctcgggcatctggcgctcaccgagaaggagtacctgggcgtcatccggctcggc
cagaacacggtcaccgacgacgccgagggcgagttcaccggcggcgctggcgcacccggc
gtggaccgggccgccctggacgccgcggtggcggcgctgaccggcgacatcctccaggtc
cccgccagcgtcagcgccatcaaggtcgacggcaagcggtcctacaagcgggtcagggag
ggcgaggacgtcgccctccccgcgcggccggtgacggtgcgctccttcgacgtgcaccag
gtgagcgcggcggtggccgaggacggcacccccgtcaccgacgtcaccgtgggcgtggtg
tgctcctccgggacgtacatccgggcgctggcccgcgacctgggcgcggcgctgggcacc
ggcggccatctgacggcgctgcgccgcacccgggtcgggccgtacggcctggccgggccc
ggcggcgcccgcaccctggacgcgctgcgcgccgagctgaccgtgctgccgctggcggac
gccgccgcggcggcgttcccgcgctgggacgtggacgagcggcaggcgcgcctcatcggc
aacggggtgcgcatcgcggcgaccggactgcccgacggcccggtggcggtgttcggtccg
cagggcgatctggtggcgctgatcgacgcggcgggggacgcgcgggccaagagcctcgcg
gtgttcgccgccccggcggcctccccgtcgtga
DBGET
integrated database retrieval system
