Streptomyces harbinensis: HUT13_22835
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Entry
HUT13_22835 CDS
T07389
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
shar
Streptomyces harbinensis
Pathway
shar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HUT13_22835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shar03021
]
HUT13_22835
Transcription machinery [BR:
shar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUT13_22835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
Pup
Motif
Other DBs
NCBI-ProteinID:
QKV71281
UniProt:
A0A7H8H7G1
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Position
5014179..5015795
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AA seq
538 aa
AA seq
DB search
MSASTSRTLPAEIAESNSVMALIERGKAEGQIAGDDVRRAFEADQIPSTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSATAKTSAKRTATKTVAAKTVSVHQATATARPGATVTD
PEGAEAEDGSTGAAKKTAAKKTAAKKATAKKTAAKKAPAKKATAKKTATKKTSAKKEVVD
ELLDGDEDVLEESAAERAAKGGKLTEGPDGKPENEGFVLSDEDEDDAPAQQVAAAGATAD
PVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEDKLAGSDKIAPKLKHELEIISEDGRR
AKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWW
IRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKV
VEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSER
EAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacttcccgtactctccccgcggagatcgccgaatccaattctgtgatg
gcgctcatcgagcggggaaaggccgaggggcagatcgccggcgatgacgtgcgccgggcc
ttcgaggccgaccagatcccgtcaacccagtggaagaacgttctgcgcagcctcaaccag
atcctcgacgaggagggcgtgacgctgatggtgagtgccgccgaggcccccaagcgcacc
cggaagagtgccaccgcgaagacgtcggccaagcgcaccgcgaccaagaccgtcgccgcc
aagaccgtctccgtccaccaggccaccgccacggctcgtccgggtgccacggtgaccgac
cccgagggcgcggaggccgaggacggctccacgggcgccgccaagaagaccgctgcgaag
aagacggccgcgaagaaggccacggcgaagaagaccgcggccaagaaggcgcccgcgaag
aaggccacggccaagaagaccgccaccaagaagacctccgccaagaaggaggtcgtcgac
gagctgctcgacggcgacgaggacgtcctggaggagtcggcggccgagcgcgccgccaag
ggcggcaagctcaccgagggccccgacggcaagcccgagaacgagggcttcgtgctctcg
gacgaggacgaggacgacgcccccgcgcagcaggtcgccgcggcgggtgccaccgccgac
cccgtcaaggactacctcaagcagatcggcaaggtccccctgctcaacgcggagcaggag
gtcgagctggccaagcgcatcgaggccggtctcttcgccgaggacaaactggccggctcc
gacaagatcgcccccaagctcaagcacgagctggagatcatctccgaggacggccggcgc
gccaagaaccacctgctggaggccaacctccggctggtcgtctccctcgccaagcgctac
accggtcgcggcatgctcttcctggacctcatccaggagggcaacctcggtctgatccgc
gcggtggagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtgg
atccggcaggcgatcacccgcgcgatggccgaccaggcccgcaccatccgtatcccggtg
cacatggtcgaggtcatcaacaagctcgcccgcgtccagcggcagatgctccaggacctg
ggccgcgagcccaccccggaggagctggccaaggagctggacatgacgcccgagaaggtc
gtcgaggtccagaagtacggccgcgagccgatctccctgcacaccccgctcggcgaggac
ggcgacagcgagttcggtgacctcatcgaggactccgaggccgtggtcccggccgacgcc
gtcagcttcacccttctgcaggagcagctgcactcggttctggacacgctcagcgagcgg
gaggccggcgtggtctccatgcgcttcggtctcaccgacgggcagcccaagaccctggac
gagatcggcaaggtctacggcgtgaccagggagcggatccgccagatcgagtccaagacc
atgtccaagctgcggcacccctcccgctcgcaggtgctgcgggactacctcgactag
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