KEGG   Streptomyces harbinensis: HUT13_22835
Entry
HUT13_22835       CDS       T07389                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
shar  Streptomyces harbinensis
Pathway
shar02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:shar00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HUT13_22835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shar03021]
    HUT13_22835
Transcription machinery [BR:shar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HUT13_22835
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 Pup
Other DBs
NCBI-ProteinID: QKV71281
UniProt: A0A7H8H7G1
LinkDB
Position
5014179..5015795
AA seq 538 aa
MSASTSRTLPAEIAESNSVMALIERGKAEGQIAGDDVRRAFEADQIPSTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSATAKTSAKRTATKTVAAKTVSVHQATATARPGATVTD
PEGAEAEDGSTGAAKKTAAKKTAAKKATAKKTAAKKAPAKKATAKKTATKKTSAKKEVVD
ELLDGDEDVLEESAAERAAKGGKLTEGPDGKPENEGFVLSDEDEDDAPAQQVAAAGATAD
PVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEDKLAGSDKIAPKLKHELEIISEDGRR
AKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWW
IRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKV
VEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSER
EAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1617 nt   +upstreamnt  +downstreamnt
gtgtcggccagcacttcccgtactctccccgcggagatcgccgaatccaattctgtgatg
gcgctcatcgagcggggaaaggccgaggggcagatcgccggcgatgacgtgcgccgggcc
ttcgaggccgaccagatcccgtcaacccagtggaagaacgttctgcgcagcctcaaccag
atcctcgacgaggagggcgtgacgctgatggtgagtgccgccgaggcccccaagcgcacc
cggaagagtgccaccgcgaagacgtcggccaagcgcaccgcgaccaagaccgtcgccgcc
aagaccgtctccgtccaccaggccaccgccacggctcgtccgggtgccacggtgaccgac
cccgagggcgcggaggccgaggacggctccacgggcgccgccaagaagaccgctgcgaag
aagacggccgcgaagaaggccacggcgaagaagaccgcggccaagaaggcgcccgcgaag
aaggccacggccaagaagaccgccaccaagaagacctccgccaagaaggaggtcgtcgac
gagctgctcgacggcgacgaggacgtcctggaggagtcggcggccgagcgcgccgccaag
ggcggcaagctcaccgagggccccgacggcaagcccgagaacgagggcttcgtgctctcg
gacgaggacgaggacgacgcccccgcgcagcaggtcgccgcggcgggtgccaccgccgac
cccgtcaaggactacctcaagcagatcggcaaggtccccctgctcaacgcggagcaggag
gtcgagctggccaagcgcatcgaggccggtctcttcgccgaggacaaactggccggctcc
gacaagatcgcccccaagctcaagcacgagctggagatcatctccgaggacggccggcgc
gccaagaaccacctgctggaggccaacctccggctggtcgtctccctcgccaagcgctac
accggtcgcggcatgctcttcctggacctcatccaggagggcaacctcggtctgatccgc
gcggtggagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtgg
atccggcaggcgatcacccgcgcgatggccgaccaggcccgcaccatccgtatcccggtg
cacatggtcgaggtcatcaacaagctcgcccgcgtccagcggcagatgctccaggacctg
ggccgcgagcccaccccggaggagctggccaaggagctggacatgacgcccgagaaggtc
gtcgaggtccagaagtacggccgcgagccgatctccctgcacaccccgctcggcgaggac
ggcgacagcgagttcggtgacctcatcgaggactccgaggccgtggtcccggccgacgcc
gtcagcttcacccttctgcaggagcagctgcactcggttctggacacgctcagcgagcgg
gaggccggcgtggtctccatgcgcttcggtctcaccgacgggcagcccaagaccctggac
gagatcggcaaggtctacggcgtgaccagggagcggatccgccagatcgagtccaagacc
atgtccaagctgcggcacccctcccgctcgcaggtgctgcgggactacctcgactag

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