Streptomyces harbinensis: HUT13_22850
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Entry
HUT13_22850 CDS
T07389
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
shar
Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shar03032
]
HUT13_22850
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_22850
Enzymes [BR:
shar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUT13_22850
DNA replication proteins [BR:
shar03032
]
Prokaryotic type
DNA Topoisomerases
HUT13_22850
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUT13_22850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
QKV71284
LinkDB
All DBs
Position
5017476..5019593
Genome browser
AA seq
705 aa
AA seq
DB search
MTADTSVPSTALLTGSDTGGNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEII
DNSVDEALGGHCDRIEVILHEDGSVEVRDNGRGIPVDIEPKTGLSGVEVVMTKLHAGGKF
GGGSYAASGGLHGVGASVVNALSARLDVEVDRGGATHSISFRRGTPGIFTESGAEAPFDP
ADGLLKGKKIPKTRTGTRVRYWADRQIFLKDARLSLETLHARARQTAFLVPGLTLIVRDE
RGTDGAGPVEETFHYDGGISEFCEFLAQDKPICDVQRLRGSGTFKETVPVLDDRGHMIPT
EVKRDLDVDIALRWGTGYDTTVKSFVNIIATPKGGTHVSGFERAVTQTVNDVLRATKLLR
VAEDNVVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAASRIVLQVVAKELKAFLTST
KRDDKQQARAVLEKVVAASRTRIAARQHKEAQRRKTALESSALPAKLADCRSDDVDRSEL
FIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKSSVSDMLKNAECSAIIQVIGAGSGR
TFDIDQARYGKVIFLADADVDGAHIRCLLLTLFQRYMRPMVEQGRVFSAVPPLHRIELSN
PKKGQDKYLYTYSDNELRQTLLDLDRRGTRYKEAIQRYKGLGEMDADQLAETTMDPRFRT
LRRINISDLEAAETAFSLLMGNEVAPRREFITASAATLDRSRIDT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgacacgtccgtgccatccaccgcactgctgaccggaagtgacaccggtggc
aactacaccgcgcggcacctgctcgtcctggagggcctggaggcggtgcgcaagcgcccc
ggcatgtacatcggctccaccgacagccgcgggctcatgcactgcctgtgggagatcatc
gacaactccgtcgacgaggccctgggcggccactgcgaccgcatcgaggtgatcctccac
gaggacggctcggtcgaggtccgggacaacggccgcggcatcccggtcgacatcgagccc
aagaccggcctctccggcgtcgaggtggtgatgaccaagctgcacgcgggcggaaagttc
ggcggcggctcgtacgcggcctccggcggcctgcacggcgtcggcgcctccgtcgtcaac
gccctctccgcccgcctggacgtcgaggtcgaccgcggcggcgccacccacagcatcagc
ttccggcgcggcacccccggcatcttcaccgaatccggcgccgaggcgcccttcgacccc
gccgacggcctgctcaagggcaagaagatccccaagaccaggaccggcacccgggtgcgc
tactgggcggaccggcagatcttcctcaaggacgccaggctctccctggagaccctgcac
gcccgtgcccggcagaccgccttcctggtgccgggcctcaccctgatcgtccgtgacgaa
cgcggcaccgacggtgcggggccggtcgaggagaccttccactacgacggcggcatcagc
gagttctgcgagttcctcgcccaggacaagccgatctgcgacgtgcagcggctgcgcggc
tccggcaccttcaaggagaccgtccccgttctcgacgaccgcggccacatgatccccacc
gaggtgaagcgcgacctcgacgtcgacatcgcgctgcgctggggcaccggctacgacacc
acggtgaagtccttcgtcaacatcatcgccacccccaagggcggcacccacgtctccggc
ttcgagcgggccgtcacccagacggtgaacgacgtcctgcgcgccaccaagctgctgcgc
gtcgccgaggacaacgtggtcaaggacgacgcgctggaggggctcaccgcggtggtcacc
gtccggctggccgagccgcagttcgagggccagaccaaggaggtcctgggcacctcggcg
gcctcccggatcgtcctccaggtggtggccaaggagctgaaggcgttcctgacctccacc
aagcgggacgacaagcagcaggcccgcgccgtcctggagaaggtcgtggcggcctcccgc
acccggatcgccgcccggcagcacaaggaggcgcagcgccgcaagaccgccctggagtcc
tcggcgctgcccgccaagctggccgactgccgcagcgacgacgtggaccgcagcgagctg
ttcatcgtcgagggggacagcgcgctcggcaccgcgaaactggcccgcaactccgagttc
caggcgctgctgcccatccggggcaagatcctcaacgtccagaagtcctcggtctccgac
atgctgaagaacgccgagtgctcggccatcatccaggtgataggggccggctccgggcgg
accttcgacatcgaccaggcccgttacggcaaggtgatcttcctcgccgacgcggacgtg
gacggcgcccacatccgctgtctgctgctgaccctcttccagcgctacatgcgccccatg
gtcgagcagggccgggtcttctcggcggtgccgccgctgcaccggatcgagctgagcaac
ccgaagaagggccaggacaagtacctgtacacctactcggacaacgagctgcggcagacc
ctgctggacctcgaccggcgcggcacccgctacaaggaggccatccagcgctacaagggc
ctcggcgagatggacgccgaccagttggcggagaccaccatggacccccggttccgcacg
ctgcggcggatcaacatctccgacctggaggccgccgagaccgcgttcagcctgctcatg
ggcaatgaggtggccccgcgccgggaattcatcaccgcctcggccgccacgctggaccgg
tcgcggatcgacacctga
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