Streptomyces harbinensis: HUT13_24440
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Entry
HUT13_24440 CDS
T07389
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
shar
Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_24440
Enzymes [BR:
shar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HUT13_24440
DNA repair and recombination proteins [BR:
shar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HUT13_24440
Prokaryotic type
HUT13_24440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKV71568
LinkDB
All DBs
Position
complement(5378349..5379710)
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AA seq
453 aa
AA seq
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MDVAVVLFTSDLRLRDQPALHAALRAADAVVPLFVRDPAVDRAGFAAPNRLAFLADALAD
LDGALRERGGHLVLREGDVVEEVCAVVSRTGAGEVHLSGGVSGFARHREERLRRELERLR
CRLRVHDGVVTVVPPGAVVPDQRDHFAVFTPYFRRWRESARRDPLPAPRRVRVPDGVGGA
ALPQRRRLSGVSPGVPAGGEREGRRRMAAWLRSGVDAYAERHDDLAGDATSRLSPYLHFG
CLSAAELARKAREHGGAGAEAFERQLAWRDFHHQVLAARPDAAWSDYRARGDRWRRAGRD
ADAWRAGRTGYPVVDAAMRQLAHEGWMHNRGRLLVGSFLTKTLYTDWRVGAEHFLGLLVD
GDLANNQLNWQWVAGTGTDTRPNRVLNPAAQGRRYDPDGGYVRRWVPELDGVPVRALHEP
WRLEPATLRERGYPEPIVELDAGRDRFLAARGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgccgtcgtcctgttcaccagtgatctgcggctgcgcgaccagcccgcgctg
cacgccgcgctgcgggccgccgacgcggtcgtgccgctgttcgtccgcgacccggccgtg
gaccgcgccgggttcgcggcgcccaaccgactggcgttcctcgccgacgcgctcgccgac
ctggacggcgcgctgcgggagcgcggcgggcacctggtgctgcgcgagggggacgtggtg
gaggaggtgtgcgcggtggtgtcgcggaccggcgccggcgaggtgcatctgtcgggcggg
gtgagcggcttcgcgcggcaccgcgaggagcggctgcgccgggagctggagcggctgcgc
tgccggctgcgggtgcacgacggggtggtgacggtggtgccgccgggcgcggtggtgccg
gaccagcgggaccacttcgcggtgttcacgccgtacttccgccggtggcgggagagcgcg
cggcgcgatccgctgcccgcgccgcgccgggtgcgggtgccggacggggtgggcggggcg
gcgctgccgcagcggcggcggctgtccggggtctcccccggcgtgccggccggcggtgag
cgcgaggggcggcgccggatggcggcctggctgcgctcgggcgtggacgcgtacgcggag
cggcacgacgacctggccggggacgccacgtcccggctgtcgccgtatctgcacttcggc
tgtctgtcggcggccgaactggcccggaaggcgcgggagcacggcggggcgggcgccgag
gcgttcgaacggcagctggcctggcgggacttccaccaccaggtgctggcggcccgcccg
gacgccgcgtggagcgactaccgggcccggggcgatcgctggcggcgcgcgggccgggac
gcggacgcctggcgcgcgggccgcaccggctacccggtcgtggacgcggcgatgcggcag
ctggcgcacgagggctggatgcacaaccgggggcggctgctggtgggcagcttcctgacc
aagacgctgtacaccgactggcgggtgggtgccgagcacttcctggggctgctggtggac
ggcgatctggcgaacaaccagctgaactggcagtgggtggcgggcaccggcaccgacacc
cggcccaaccgggtgctcaacccggcggcccagggccggcgttacgacccggacggcgga
tacgtacggcgctgggtgccggagctggacggggtgccggtgcgggcgctgcacgagccg
tggcggctggagcccgcgacgctgcgggagcgcggctatccggagcccatcgtggaactg
gacgccggccgcgaccggtttctggcggcccggggacggtga
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