Streptomyces harbinensis: HUT13_24960
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Entry
HUT13_24960 CDS
T07389
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
shar
Streptomyces harbinensis
Pathway
shar00523
Polyketide sugar unit biosynthesis
shar01100
Metabolic pathways
shar01110
Biosynthesis of secondary metabolites
shar01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HUT13_24960 (rfbH)
Enzymes [BR:
shar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
HUT13_24960 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QKV71659
UniProt:
A0A7H8H723
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All DBs
Position
5524412..5525716
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AA seq
434 aa
AA seq
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MSDRKDLILEEVRNYHQEVSPEREFVPGQTEIWPSGAVLSDADRMALVEAALEMRIAAGR
SSRKFESTFARRLKRRKAHLTNSGSSANLLAVSALTSHVLEDRRLKPGDEIITVAAGFPT
TVNPILQNGLIPVFVDVDLGTYNTTADRVAAAIGPRTRAIIIAHALGNPFEVREIAELAT
EHELFLIEDNCDAVGSLYEGELTGTFGDMTTVSFYPAHHLTMGEGGCVLTSNLALARIVE
SLRDWGRDCWCEPGENDRCLKRFTYQMGTLPAGYDHKYIFSHVGYNLKATDIQAALGLTQ
LAELDSFIAKRRHNWRRLREGLDGVPGLLLPEATPRSEPSWFGFAITVDPGAPFGRAALV
DFLEDRRIGTRRLFAGNLTRHPAYIDQPHRVVGELTNSDIITEHTFWIGVYPALTDEMLD
YVTASIKEFVAAHG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccgcaaggacctgattctggaggaggtccgcaactaccaccaggaggtctcg
ccggagcgtgagttcgtccccggacagaccgagatctggccctcgggcgcggtgctgtcc
gacgccgaccggatggcgctggtcgaggcggccctggagatgcgcatcgccgcggggcgc
agctcgcgcaaattcgagtcgacgttcgcacgccggctgaagcgccgcaaagcacatctg
acgaactccggctcctcggcgaatctcctcgctgtctccgccctcacctcacatgtgctg
gaagaccgccggctcaagccgggggacgagatcatcacggtggcggcgggcttcccgacg
acggtcaaccccatcctccagaacggcctgatcccggtcttcgtggatgtggacctgggc
acgtacaacacgaccgccgaccgggtggcggcggccatcggcccccggacgcgggcgatc
atcatcgcccacgccctgggcaaccccttcgaggtccgcgagatcgccgaactggcgacg
gagcacgaactctttctcatcgaggacaactgcgacgcggtcggctcactgtacgagggt
gaactcaccggcacgttcggtgacatgaccacggtcagcttctacccggcgcaccacctc
accatgggtgagggcggctgtgtcctgacctcgaatctggccctggcccgaatcgtggag
tcgctgcgggactggggacgggactgctggtgcgagccgggcgagaacgaccggtgcctg
aagcgattcacctaccagatgggtaccctgccggccggctacgaccacaagtacatcttc
tcgcacgtgggatacaacctgaaggcgaccgacatccaggccgcgctcgggctgacccag
ctggccgagctcgactccttcatcgccaagcgccggcacaactggcggcggctgcgcgag
ggcctggacggcgtgccggggctactgctgcccgaagccaccccgcgatccgagcccagc
tggttcggcttcgcgatcaccgtggaccccggggcgccgttcggacgcgccgcactggtg
gacttcctggaggaccgccgcatcggtacccggcgtctgttcgcgggcaatctgacccgc
cacccggcctacatcgatcaaccgcaccgggtggtgggggaactcaccaacagcgacatc
atcaccgagcacaccttctggatcggggtctatccggcgctgaccgacgaaatgctggac
tacgtcaccgcctcgatcaaggaattcgtggccgcacacggctga
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