Streptomyces harbinensis: HUT13_25175
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Entry
HUT13_25175 CDS
T07389
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
shar
Streptomyces harbinensis
Brite
KEGG Orthology (KO) [BR:
shar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shar03400
]
HUT13_25175
Enzymes [BR:
shar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HUT13_25175
DNA repair and recombination proteins [BR:
shar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HUT13_25175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QKV71696
LinkDB
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Position
5568515..5570026
Genome browser
AA seq
503 aa
AA seq
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MAARTHWLFGDQLGPRFTDPRHSGCDRGAPLLMIEARSVLRRRRFHRAKAHLVLSAMRHR
AAELGDRVRYVRADTYRQGLRTALRSGDRLTVHAPTSRAALDFVTSLDGVDVLEPRGFLT
SRADFATWAEGRGAQGLRMEDFYRWVRTSQGLLMDDGGPAGGTWNLDHDNREPPPRDHDR
LPVPPPWQAKEDAIDEEVRHDLDRWERKGLVSFAGRDGPRRFPATRRQALAALRHFVDHR
LPAFGSYEDAMLARDGVLAHSLLSSSLNLGLLDPAECVGRAELAWRSGNAPLNSAEGYIR
QVAGWREFVWQLYWHFGPAYRDRNALGHHEPLPRWFLDLDADAVRARCLSTTLAQVRDTG
WTHHIPRLMVLGSRALQDGWDPAAVTDWFHRCFVDGYDWVMLPNVLGMSQYADDGAMTSK
PYTTGGAYIHRMSDLCDGCAYRPSDRTGDRACPYTTGYWAFLHRHRERFAHHPRMARTLH
TLDRLDDLADVLAAAARRGAAPP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacggacgcactggctcttcggggaccagctcggcccccgcttcaccgacccc
cggcacagcggctgcgaccgcggggcaccgctgctgatgatcgaggcccgctcggtcctg
cgccgccgccggttccaccgcgccaaggcccatctcgtcctctccgccatgcgccaccgc
gccgccgaactcggcgaccgcgtccgctacgtacgggccgacacctaccggcagggcctg
cgcacggcgctgcgctccggcgaccggctgaccgtccacgccccgacctcccgcgccgcg
ctggacttcgtcacctccctggacggcgtggacgtgctggagccccgcggattcctcacc
tcccgcgccgacttcgccacctgggccgaggggcgcggcgcacagggcctgcgcatggag
gacttctaccggtgggtgcgcacctcacagggcctgctgatggacgacggcggcccggcc
ggcggcacctggaacctcgaccacgacaaccgcgaacccccgccgcgcgaccacgaccgg
ctcccggtcccgccaccctggcaggccaaggaagacgccatcgacgaagaggtccggcac
gacctcgaccggtgggaacgcaagggcctggtctccttcgccggccgggacggcccgcgc
cgcttccccgccacccggcggcaggcactggccgccctgcgccacttcgtggaccaccgg
ctgccggcgttcggcagctacgaggacgccatgctcgcccgcgacggcgtcctcgcccac
agcctgctctccagttccctcaacctcggactgctcgacccggccgagtgcgtgggccgc
gccgaactggcctggcggtccgggaacgccccgctcaacagcgccgagggctacatccgg
caggtcgccgggtggcgggagttcgtgtggcagctgtactggcacttcggccccgcctat
cgcgaccgcaacgcgctcggccaccacgagccgctgccgcgctggttcctcgacctggac
gccgacgccgtacgggcccgctgcttgtccaccacccttgcccaggtccgcgacaccggc
tggacccaccacatcccgcgcctgatggtgctgggcagccgcgccctccaggacggctgg
gacccggccgcggtcaccgactggttccaccgctgcttcgtggacggctacgactgggtg
atgctgcccaacgtcctgggcatgtcccagtacgcggacgacggcgcgatgaccagcaag
ccgtacaccaccggcggcgcctacatccaccggatgagcgacctgtgcgacggctgcgcc
taccgcccctcggaccgcaccggcgaccgcgcctgcccgtacaccaccggctactgggcc
ttcctccaccgccaccgcgagcgcttcgcccaccacccccggatggcccgcaccctccac
accctggaccgcctggacgacctcgccgacgtcctggccgccgccgcccgccgcggcgcc
gcaccgccctga
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