Streptomyces halobius: K9S39_05055
Help
Entry
K9S39_05055 CDS
T09588
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
shau
Streptomyces halobius
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shau03032
]
K9S39_05055 (gyrB)
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_05055 (gyrB)
Enzymes [BR:
shau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K9S39_05055 (gyrB)
DNA replication proteins [BR:
shau03032
]
Prokaryotic type
DNA Topoisomerases
K9S39_05055 (gyrB)
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K9S39_05055 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UQA97624
LinkDB
All DBs
Position
1048413..1050395
Genome browser
AA seq
660 aa
AA seq
DB search
MGDTSYTASQIQVLEGLEAVRKRPGMYIGSTGERGLHHLVYEIVDNSVDEALAGHADRID
VTILADGGVKVVDNGRGIPVDIVPSEGKPALEVVLTVLHAGGKFGGGGYAVSGGLHGVGM
SVVNALSTRVEAEVRYGGHRWSQEYEKGVPTTALKQHEETSETGTSLTFWADGDIFETTE
YSFETLSRRFQEMAFLNKGLTLTLTDERESAKATVGADDPDADVSEPAARTVTYFYEGGI
VDFVKHLNVRKGEPVHPSIISLEAEDTARLLSVEVAMQWNIQFSDSVYSFANTIHTHEGG
THEEGFRAAMTGLVNRYAREKKFLREKDDNLAGEDIREGLTAIISVKLGEPQFEGQTKTK
LGNTEAKTFVQKVVHEHLNDWFDRNPNEAADIIRKSIQAATARVAARKARDLTRRKGLLE
SASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKSGRNPQYQAILPIRGKILNVEKARID
KILQNTEVQALISAFGTGVHEDFDIEKLRYHKIILMADADVDGQHINTLLLTFLFRFMRP
LVEAGYVYLSRPPLYKIKWGRDDFEYAYSDRERDALVTRGTGSGKRLRDDTIQRFKGLGE
MNAEELRITTMDVDHRVLGQVTLDDAAQADDLFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgggggacacgtcctacaccgccagccagatccaggtcctggagggcctggaggcggtc
cgcaagcggcctggcatgtacatcggctcgaccggcgagcgcggtctgcaccacctggtc
tacgagatcgtcgacaactcggtcgacgaggccctcgcggggcacgcggaccgcatcgac
gtgacgatcctggccgacggcggggtcaaggtcgtcgacaacgggcgtggcatcccggtg
gacatcgtgccgtccgagggcaagccggccctggaggtcgtactgacggtgctgcacgcg
ggcggcaagttcggcggcggcggctacgccgtctccggcggtctgcacggcgtgggcatg
tcggtggtcaacgccctgtcgacgcgggtggaagcggaggtgcgctacggcgggcaccgc
tggagccaggagtacgagaagggcgtgccgaccaccgcgctcaagcagcacgaggagacc
tccgagactggcacctcgctgacgttctgggccgacggcgacatcttcgagaccaccgag
tactccttcgagacgctgtcgcgccgcttccaggagatggccttcctcaacaagggcctg
accctgacgctgaccgacgagcgtgaatccgcgaaggccacggtgggcgccgacgacccg
gacgcggacgtgtccgagccggccgcgcggacggtcacgtacttctacgagggcggcatc
gtcgacttcgtgaagcacctgaacgtgcgcaagggcgagccggtccacccgtcgatcatc
tcgctggaggcggaggacaccgcgcgcctgctgtcggtagaagtcgcgatgcagtggaac
atccagttctccgacagcgtgtactccttcgcgaacacgatccacacgcacgagggcggt
acccacgaagagggcttccgcgcggcgatgacgggtctggtcaaccgctacgcgcgggag
aagaagttcctgcgcgagaaggacgacaacctcgcgggtgaggacatccgtgagggtttg
acggcgatcatctcggtgaagctgggtgagccgcagttcgagggtcagacgaagaccaag
ctgggcaacacggaggcgaagaccttcgtgcagaaggtcgtgcacgagcacctcaacgac
tggttcgaccggaacccgaacgaggccgcggacatcatccgcaagtcgatccaggcggcc
acggcgcgcgtcgcggcccgcaaggcgcgtgacctgacgcgtcgtaaggggctgctggag
agtgcctcgctgccgggcaagctgtcggactgccagtcgaacgacccgacgaagtgcgag
atcttcatcgtcgagggtgactccgccggtggttcggcgaagtccggtcgtaatccgcag
taccaggcgatcctgccgatccgaggcaagatcctgaacgtcgagaaggcgcggatcgac
aagatcctgcagaacaccgaggtccaggcgctgatcagcgccttcggtaccggtgtgcac
gaggacttcgacatcgagaagctccgctatcacaagatcatcctgatggcggacgccgac
gtcgacggccagcacatcaacaccctgctgctgaccttcctgttccgcttcatgcggccg
ctggtcgaggccggttacgtgtacctgtcgcgtccgccgctgtacaagatcaagtggggt
cgtgacgacttcgagtacgcctactccgaccgcgagcgcgacgcactcgtcacgcgcgga
accggcagcggcaagcgcctgcgcgacgacaccatccagcgcttcaagggcttgggcgag
atgaacgccgaggaactgcgcatcaccaccatggacgtggaccaccgcgtgctcggccag
gtcaccctggacgacgccgcgcaggccgacgacctgttctcggtgctgatgggtgaggac
gtcgaagcccgacgctccttcatccagcgcaacgccaaggacgtccgcttcctcgacatc
tga
DBGET
integrated database retrieval system
