Streptomyces halobius: K9S39_05060
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Entry
K9S39_05060 CDS
T09588
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
shau
Streptomyces halobius
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shau03032
]
K9S39_05060
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_05060
Enzymes [BR:
shau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K9S39_05060
DNA replication proteins [BR:
shau03032
]
Prokaryotic type
DNA Topoisomerases
K9S39_05060
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K9S39_05060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
UQA91332
LinkDB
All DBs
Position
1050487..1052601
Genome browser
AA seq
704 aa
AA seq
DB search
MSTPPSARPRPPAGDGSDYTARHLLVLEGLEAARKRPGMYIGSTDSRGLMHCLWEIIDNS
VDEALGGYCDHIEVILHEDASVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGKFGGG
SYAASGGLHGVGASVVNALSARLDIEVDRAGHTYAIGFRRGVPGHYSGLGEDADFTPGGG
LRKRKARSRNAKGTGNRTRYWADRQIFLKDAKLTLDTLYQRARQTAFLVPGLTIVVRDER
ALEGAGKTEETFRFDGGISEFCEYLAQDKAACDVLRLTGTGTFKETVPVLDDRGHMTPTE
VTRELGVDIALRWGTGYETNVKSFVNIIATPKGGTHISGFERSVTKTVNEVLRSAKLLRV
AEDDVVKDDAMEGMTAVVTVRLAEPQFEGQTKEVLGTSAAARIVAAVVAKELKAFLTSTK
RDDKQQARAVMEKIVAAARTRIAARQHKEAQRRKTALESSSLPAKLADCRSDDVERSELF
IVEGDSALGTAKLGRNSEFQALLPIRGKILNVQKSSVSEMLKNTECGAIIQVIGAGSGRT
FDLDAARYGKIVLLVDADVDGAHIRCLLLTLFQRYMRPMVEAGRVFAAVPPLHRIELLQP
KKGQNKYVYTYSDNELRQTLLEYQRKNIRYKDSIQRYKGLGEMDADQLAETTMDPRFRTL
RRINIGDLDGAEQVFDLLMGNEVAPRKEFITSSAATLDRSRIDT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactccgccttccgcccgtccccgccctccggccggagacggctccgactacacc
gcgcggcacctgctcgtcctcgaaggactggaggccgcccgcaagcgccccggcatgtat
atcggctccaccgacagccgtggcctgatgcactgcctctgggagatcatcgacaattcc
gtcgacgaggccctgggcgggtactgcgaccacatcgaggtgatcctccacgaggacgcc
tcggtcgaggtccgggacaacggccgcggcatcccggtggacgtcgagcccaagaccggc
ctgtccggcgtcgaggtcgtcatgaccaagctgcacgccggaggcaagttcggcggtggg
tcgtacgcggcctccggcggcctgcacggcgtcggcgcctccgtggtcaacgccctctcc
gcccgcctcgacatcgaagtggacagagccggccacacctacgcgatcggcttccgccgc
ggggtgcccggccattactccggactcggtgaggacgccgacttcaccccgggcggaggg
ctgcgcaagcggaaggcgaggagccgcaacgcgaagggcacgggcaaccgcacgcgttac
tgggcggaccggcagatcttcctcaaggacgccaagctcacgctggacacgctgtaccag
cgagcccgccagacggccttcctcgtccccggcctgaccatcgtggtccgcgacgagcgc
gctctcgaaggggcgggcaagaccgaggagaccttccgcttcgacgggggcatcagcgag
ttctgcgagtacctggcccaggacaaggcggcctgtgacgtcctgcgcctgacgggcacg
ggaaccttcaaggagaccgtcccggtcctcgacgaccgcggccacatgacgcccaccgag
gtcacccgtgagctcggcgtggacatcgccctgcgctggggcacgggctacgagacgaac
gtgaagtcgttcgtgaacatcatcgccacccccaagggcggcacccacatctccggcttc
gagcgctcggtcaccaagaccgtgaacgaggtcctgcgctccgcgaagctcctgcgcgtg
gccgaggacgacgtcgtcaaggacgacgcgatggagggcatgaccgccgtcgtcaccgtc
cgcctcgccgagccgcagttcgagggccagaccaaggaggtgctcggcacctccgcggcc
gcccggatcgtcgccgccgtggtcgccaaggagctcaaggccttcctgacctccaccaag
cgggacgacaagcagcaggcccgcgccgtgatggagaagatcgtcgcggccgcccgcacc
cggatcgcggcccgtcagcacaaggaggcgcagcgccgcaagacggcgctggagtcctcc
tcgctgcccgcgaagctggccgactgccgcagcgacgacgtggagcgcagcgagctcttc
atcgtcgagggcgactcggcgctcggtaccgccaagctcggccggaactccgagttccag
gcgctgctgccgatccgcggcaagatcctcaacgtccagaagtcgtcggtctcggagatg
ctcaagaacaccgagtgcggcgcgatcatccaggtcataggagccggctcgggccggacc
ttcgacctcgacgccgcccgctacggcaagatcgttctgctcgtcgacgccgacgtggac
ggcgcgcacatccgctgcctgctgctcaccctcttccagcggtacatgcgcccgatggtc
gaggccggccgggtcttcgcggccgtgccgccgctgcaccggatcgagctgctccagccc
aagaagggccagaacaagtacgtctacacgtactccgacaacgagctgcgccagacgctg
ctcgagtaccagcgcaagaacatccgctacaaggactcgatccagcgctacaagggcctg
ggcgagatggacgcggaccagctggcggagaccaccatggacccccgcttccgcaccctg
cgccggatcaacatcggcgacctcgacggcgccgagcaggtcttcgacctcctcatgggc
aacgaggtggccccgcgcaaggagttcatcaccagctccgcggccaccctggaccgctcc
cgcatcgacacctga
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integrated database retrieval system
