KEGG   Streptomyces halobius: K9S39_05260
Entry
K9S39_05260       CDS       T09588                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
shau  Streptomyces halobius
Pathway
shau03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:shau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    K9S39_05260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shau03400]
    K9S39_05260
DNA repair and recombination proteins [BR:shau03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     K9S39_05260
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: UQA91364
LinkDB
Position
complement(1083207..1083983)
AA seq 258 aa
MRPAGVGTLSVGLIAVSVELYPATQGESAGRAHEVHGVEGCRSRIRHRRVCEAGHEVPYE
QVARGINTEAGTVILSDEDLAQLPLPTRRTVELVGFIPSSAVDPLWFDRGYYISPRGPGS
ARPYALLAAALSRSGRVGVGKTALRTRERPVVVRPYGARLALHTVYWPRERRPPPEDRAF
GVPVSERELAMAQTLVEALGAEELPEMHDDYAAALDRLVEAKISGGELAAPPEAPAVMDL
MAALEESIRAARAQEGDP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaggccggcgggggtggggacgctgtcggtggggttgatcgccgtatcggtagagctg
tatccggctacgcagggggagagcgctggacgggcgcatgaggtgcacggcgttgaggga
tgccggagccgtattcggcatcgacgcgtctgcgaggccggacatgaggtgccctacgag
caggtggcccgcggtatcaacacagaggccggcactgtgatcctgtcagacgaggacctt
gcccagcttcccttgccgacccggcggacggtggagctggtcggcttcatcccgtcgagc
gctgtggacccattgtggttcgaccgtggttactacatttcaccgcgcgggcccggatcg
gcccgaccgtatgccctgctcgccgcggctttgtcgcgtagcggtcgggtaggcgttggc
aagacggcgctcaggactcgcgagcggcccgtggttgtccgcccgtacggcgctcgcctc
gcgttgcacacggtgtactggccgcgcgagcgccgtcctccgcccgaggaccgcgcgttt
ggtgtgccggtaagcgagcgtgaactggcgatggcgcaaacgttggtcgaagcgctgggc
gccgaggagttgcccgagatgcacgacgactacgccgcggccctggaccgcctggtggag
gccaagatcagcggtggggaactcgcagcgccgccggaggctcccgcggttatggacctg
atggctgccctggaggagtccatccgcgctgcgcgcgcccaggaaggcgatccgtga

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