Streptomyces halobius: K9S39_10305
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Entry
K9S39_10305 CDS
T09588
Name
(GenBank) type IV secretion system DNA-binding domain-containing protein
Organism
shau
Streptomyces halobius
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwB_AAD_bind
DUF87
TraG-D_C
AAA_22
T4SS-DNA_transf
FtsK_SpoIIIE
DEAD
ABC_tran
Viral_helicase1
AAA_16
AAA_29
nSTAND3
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UQA92178
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Position
complement(2148762..2151170)
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AA seq
802 aa
AA seq
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MTAYELLSAAQPHGWLVDFLTHPQSFGITAIRTALDRCAASAPLLIPAALVSTACGYTGW
RRLLRWQQRKFANGARCVEVLAPPHVAPKGGEVLWAQLSGLLRPWWRRITTGQPHLAFEY
TWSHTGLCIRLWVPGTVPLGLVRRAVEAAWPGAHTRVTEPASLLPDRHPVTAGHLRLARP
DVLPLRTDHPTDPLRALLQAATGMADEESACVQILARPATGSALRRAHRQARRLKAGRTP
ARLPALAALLLHRAQPSATSKQDPEHSTAVRQSAAKLSGSQWQCVLTYAASCAPEHERAQ
DAARGRAHALASAFGLFADRTYLARTRLAHPEPHLSARHYPSSSRTTLLSVPELAALAHL
PFDADAPGIRRAGARSVLPPPQIPEPAPGNGVKPLGRSDTGARRGVGLAVPDARHHLHVM
GATGSGKSTLIANLALDDVRQHRGVIVIDPKGDLVTDLLDRLPDTCADRLVLIDPDDPHL
PPCLNVLDGADIDVVVDNITGIFRRIFTAFWGPRTDDVMRAACLTLLKHRHRTHQLVTLA
DIPRLLGESAYRLRIIPALQDPVLRGFWAWYESMSEPSRAAVVGPVMNKLRAFLLRDFAR
RAIAAGPSTFDLTQVLDGGILLARLPKGALGEETARLLGSFIVAGTWQAAAARARMPEHR
RVDATLSIDEAHNFLNLPYPLEDMLAEARGYRLSMLLAHQHLAQLPRDLREGISANARNK
VFFNASPEDANALERHTLPSLAAHDLAHLGPYQATAHLLTSGAESTAFTLTTRPLPPAVP
GRAKDLRAAAAGRNGPRPAARP
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgtacgaactgctttctgccgcccagccgcacggatggctggtcgacttcctc
acccacccgcagtcgttcgggatcacggccatccgcacagccttagaccggtgtgctgcg
tccgcacctctcctgattcccgccgccctcgtgtccacggcatgtgggtacaccggctgg
cgccgcctgttgcgctggcagcaacggaagttcgccaacggcgcccgctgcgtagaggtc
ctcgccccgccacacgtcgcgccgaaaggcggggaagtgctgtgggcgcagctgtctggt
ctcctgcgtccgtggtggcggcgtatcaccaccgggcagccccacctcgccttcgaatac
acctggtcacacaccggcctgtgtatccgcttgtgggtcccgggcacggtgccgctgggc
ctggtacgtcgcgcggtggaggccgcctggccgggcgcccacacccgcgtcaccgaaccc
gcctccctcctcccggacaggcacccggtcactgccggacacctgcgactggcccggccc
gatgtcctgcctctgcgtaccgaccaccccaccgaccccctgcgtgcactgctgcaggcc
gccaccggcatggccgacgaggagtccgcgtgcgtgcagatcctggcccgcccggccacc
ggcagcgcactacgccgagcccaccgccaggcccgccgcctcaaagccgggcgcactccc
gcccgattgcccgccctggccgcacttctcctccaccgtgcccagccctccgccacgagc
aagcaggatcccgaacacagcactgcggtacggcagtcggcggcaaagctctccggctct
cagtggcagtgcgtcctcacctacgccgcatcctgcgcccccgaacacgagcgagcgcag
gatgcggcgcggggccgggcgcatgcgctggcgtccgcgttcggcctgttcgccgaccgc
acctacctcgcccgcacccgcttggcccaccccgagccccacctgagcgcacgccactac
ccttcttcctcccgcaccacgctgctgtctgtccccgaactcgccgcccttgcccacctc
cccttcgacgcagatgcgccaggtattcggcgggccggggcacgctccgtcctgccaccg
ccgcagatccccgagcctgcgcctggcaacggggtcaagcctctggggcgttccgatacg
ggtgcccgccggggcgtaggtctggcggtgcccgacgcccgccaccatcttcatgtcatg
ggtgcgacagggtcgggcaagtccaccctgatcgcgaacctcgcgctcgatgacgtgcgc
cagcaccgcggcgtcatcgtcatcgacccaaagggcgacctggtaaccgacctgctggac
cgcctccccgacacctgcgccgaccgtctcgtgctcatcgacccggacgacccgcacctg
cccccgtgcctgaacgtgctcgacggcgcggacatcgatgtcgtcgtcgacaacatcacc
ggcatcttccgccggatcttcaccgccttctggggcccacgcaccgacgacgtcatgcgc
gccgcctgcctgaccctcctcaaacaccgccaccgcacccaccagctcgtcaccctcgcc
gacatcccccgcctgctcggcgaaagcgcctaccggctacgcatcatccccgccctccaa
gaccccgtcctgcggggcttctgggcctggtacgagtccatgtccgaaccctcccgcgcc
gcagtggtcggcccagtgatgaacaagctgcgcgctttcctgctgcgcgacttcgcccgc
cgcgccatcgccgccggcccctccaccttcgacctcacccaagtcctcgacggcggcatc
ctgctcgctcgcctccccaaaggcgccctcggcgaagaaaccgcccgcctgctgggctcc
ttcatcgtcgccggaacctggcaggccgccgctgcccgcgcacggatgcccgaacaccgg
cgggtcgacgccacgttgagcatcgacgaggcccacaacttcctgaacttgccctacccg
ctggaggacatgctcgccgaagcccgcggctaccggctgtccatgctcctggcccaccag
cacctcgcccagctcccgcgcgacctgcgcgaaggcatctccgccaacgcccgcaacaag
gtcttcttcaacgcctcccccgaagacgccaacgccctggaacgccacacgcttccctcc
ctggccgcgcacgacctggcccacctcggcccgtaccaggccacagcccacctcctgacc
agcggcgcggaatccaccgccttcaccctcaccacccgccccctaccacccgccgtaccc
ggccgcgccaaagacctacgggcagcagccgccggccgcaacggaccccgacccgccgcc
cgcccctga
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