Streptomyces halobius: K9S39_11730
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Entry
K9S39_11730 CDS
T09588
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
shau
Streptomyces halobius
Pathway
shau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K9S39_11730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shau03000
]
K9S39_11730
03400 DNA repair and recombination proteins [BR:
shau03400
]
K9S39_11730
Enzymes [BR:
shau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
K9S39_11730
Transcription factors [BR:
shau03000
]
Prokaryotic type
Helix-turn-helix
AraC family
K9S39_11730
DNA repair and recombination proteins [BR:
shau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K9S39_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UQA92416
LinkDB
All DBs
Position
complement(2466317..2467834)
Genome browser
AA seq
505 aa
AA seq
DB search
MMDDETRYEAVSSRDARFDGEFFFAVTTTGIYCRPSCPAVTPKRANVRFFPSAAAAQAAG
FRACRRCRPDAVPGSAAWNVRADLVGRAMRFIGDGVVDREGVGGLARRLGYSARQVQRQL
TAELGAGPVALARARRAHTARVLLQTTSLPVTELAFAAGFASIRQFNDTIREIYAGTPSE
LRAAARRPRAAAGTCPSPSGIPLRLAYRGPYAAAEIFDFLQVRVVPGVEEMRGTRGDRSY
RRTLRLAYGSGIAEVDEDGDGRPRRRPRAGLVCPAARGTDGGWLECRLRLTDLRDLSTAV
QRLRRLFDLDADPYAVAERLGADPRLGPLVAERPGLRSPGTVDPEELAVRTVLGGPPERA
AELVRSYGKPLDVADGGLTHLFPAPGELTGADVGEPVRALCRALADGAVLLDAGADRGAA
ERALAALPGVGPRAAAYIRMRGLGDPDVGTRTGTEPGAGAGTAVCVEDAWRPWGAYALHY
LWSAGLVPSGEMPGQGNVRLGSVCG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacgacgagaccaggtacgaagcggtgtccagccgggacgcgcggttcgacggg
gagttcttcttcgcggtgacgaccaccgggatctattgccggccgagctgccccgcggtc
actcccaagcgggcgaacgtgcggttcttcccgtcggccgccgccgcgcaggcagccggc
ttccgggcctgccggcggtgccggccggatgccgtgccgggctccgcggcctggaacgta
cgcgctgacctggtcggacgagccatgcgattcatcggggacggggtcgtcgaccgggag
ggtgtcggcgggctggcgcggcgtctgggctacagcgcgcgccaagtgcagcgccagctg
accgcggaactgggcgccggaccggtggcgttggcgcgcgcccggcgggcgcacaccgcg
cgggtgctgctgcagaccacctcgctgccggtcaccgagctggccttcgccgccggattc
gccagcatccgccagttcaacgacacgatccgggagatctacgccggcaccccgagcgag
ctgcgggcggcggcccggcggccccgcgccgccgccggcacctgtccgtcccccagcggc
ataccgctccggctcgcctaccggggtccgtacgcggcagccgagatctttgactttctg
caggtcagggtggtgcccggggtcgaggagatgcgggggacgcggggcgaccgcagctac
cgccgcaccctccggctcgcgtacgggagcggtatcgccgaggtcgacgaggacggcgac
gggcggccacggcgccggccacgggcgggcctggtgtgcccggcggcgcggggcacggac
ggtggctggctggagtgccggctgcggctgaccgatctgcgggacctgtcgacggccgtg
cagcggctgcgccggctgttcgacctggacgccgatccgtacgccgtcgccgagcgtctc
ggcgcggatccacggctcggcccgctcgtcgcggagcgcccggggctgcgctcgccgggc
accgtcgatcccgaggagctcgccgtacggaccgtgctcggcgggccgccggagcgcgcg
gcggagctggtgcggtcgtacgggaaaccgttggatgtggcggacggcgggctcacccac
ctcttcccggcgcccggcgagctgaccggagcggacgtcggggagccggtgcgggcgctg
tgcagggcgctcgctgacggggcggtcctgctggacgcgggcgccgaccgcggcgccgcc
gagcgggcactggccgcgctgccgggcgtcggcccgcgggcggcggcgtacatcaggatg
cgggggctgggcgaccctgacgtgggcacccggacggggacggaaccaggggcaggggcc
gggaccgcggtgtgtgtggaggatgcgtggcggccgtggggtgcttatgccttgcactac
ttgtggagtgccgggttggttccgtcgggggagatgcccggccagggaaacgtccggctc
gggagcgtgtgcggctag
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